RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 MYH3P11055 1940 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 ECE2O60344 883 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 CASP7P55210 303 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
DDR1-275ENST00000514434 ITGA6P23229 1130 aa16.58■□□□□ 0.24
DDR1-275ENST00000514434 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
DDR1-275ENST00000514434 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
DDR1-275ENST00000514434 PODXL2Q9NZ53 605 aa16.58■□□□□ 0.24
DDR1-275ENST00000514434 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
DDR1-275ENST00000514434 XDHP47989 1333 aa16.57■□□□□ 0.24
DDR1-275ENST00000514434 SHTN1A0MZ66 631 aa16.57■□□□□ 0.24
DDR1-275ENST00000514434 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 PSMD14O00487 310 aa16.57■□□□□ 0.24
DDR1-275ENST00000514434 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
DDR1-275ENST00000514434 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 BSDC1Q9NW68 430 aaPredicted RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
DDR1-275ENST00000514434 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
DDR1-275ENST00000514434 SPEF2Q9C093 1822 aa16.56■□□□□ 0.24
DDR1-275ENST00000514434 RTL9Q8NET4 1388 aa16.56■□□□□ 0.24
DDR1-275ENST00000514434 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
DDR1-275ENST00000514434 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
DDR1-275ENST00000514434 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
DDR1-275ENST00000514434 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
DDR1-275ENST00000514434 CNOT7Q9UIV1 285 aaKnown RBP16.56■□□□□ 0.24
DDR1-275ENST00000514434 GRM8O00222 908 aa16.55■□□□□ 0.24
DDR1-275ENST00000514434 CSF1RP07333 972 aa16.55■□□□□ 0.24
DDR1-275ENST00000514434 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
DDR1-275ENST00000514434 MIER1Q8N108 512 aa16.55■□□□□ 0.24
DDR1-275ENST00000514434 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
DDR1-275ENST00000514434 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
DDR1-275ENST00000514434 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 H7C1D1 291 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 ALDH1L1O75891 902 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 FOXO4P98177 505 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDR1-275ENST00000514434 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 MICALL2Q8IY33 904 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 TRPM4Q8TD43 1214 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
DDR1-275ENST00000514434 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
DDR1-275ENST00000514434 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
DDR1-275ENST00000514434 RBM26Q5T8P6 1007 aaKnown RBP16.53■□□□□ 0.24
DDR1-275ENST00000514434 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
DDR1-275ENST00000514434 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
DDR1-275ENST00000514434 TRAF5O00463 557 aa16.52■□□□□ 0.24
DDR1-275ENST00000514434 HIRAP54198 1017 aaPredicted RBP16.52■□□□□ 0.24
DDR1-275ENST00000514434 SAMD7Q7Z3H4 446 aa16.52■□□□□ 0.24
DDR1-275ENST00000514434 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
DDR1-275ENST00000514434 KCNJ4P48050 445 aa16.51■□□□□ 0.23
DDR1-275ENST00000514434 TBC1D10BQ4KMP7 808 aaPredicted RBP16.51■□□□□ 0.23
DDR1-275ENST00000514434 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
DDR1-275ENST00000514434 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
DDR1-275ENST00000514434 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
DDR1-275ENST00000514434 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
DDR1-275ENST00000514434 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
DDR1-275ENST00000514434 PTPRCP08575 1304 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
DDR1-275ENST00000514434 CHRNDQ07001 517 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 TXNRD3Q86VQ6 643 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 DPF2Q92785 391 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
DDR1-275ENST00000514434 ANKRD2Q9GZV1 360 aa16.5■□□□□ 0.23
DDR1-275ENST00000514434 ABT1Q9ULW3 272 aaKnown RBP16.5■□□□□ 0.23
DDR1-275ENST00000514434 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 SNAP23O00161 211 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 PLIN1O60240 522 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 TAF5LO75529 589 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 EGFRP00533 1210 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
DDR1-275ENST00000514434 KLRK1P26718 216 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
DDR1-275ENST00000514434 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
DDR1-275ENST00000514434 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
DDR1-275ENST00000514434 RSBN1LQ6PCB5 846 aaPredicted RBP16.48■□□□□ 0.23
DDR1-275ENST00000514434 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
DDR1-275ENST00000514434 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms