RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 GRIPAP1Q4V328 841 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 C3orf67Q6ZVT6 689 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 NBPF11Q86T75 865 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 SH3TC2Q8TF17 1288 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 RBM17Q96I25 401 aaKnown RBP4.45□□□□□ -1.7
CHD1-211ENST00000514344 TEX13AQ9BXU3 409 aaPredicted RBP4.45□□□□□ -1.7
CHD1-211ENST00000514344 WDFY4Q6ZS81 3184 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 RIMBP2O15034 1052 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 TEFQ10587 303 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 DPF2Q92785 391 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 FZD1Q9UP38 647 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 PTCH2Q9Y6C5 1203 aa4.45□□□□□ -1.7
CHD1-211ENST00000514344 KCNQ3O43525 872 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 HOXA10P31260 410 aaPredicted RBP4.44□□□□□ -1.7
CHD1-211ENST00000514344 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 ANKRD13DQ6ZTN6 518 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 SUPT20HQ8NEM7 779 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 ERO1AQ96HE7 468 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 FAM161BQ96MY7 647 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 FMNL2Q96PY5 1086 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 MTMR10Q9NXD2 777 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 FKBP1BP68106 108 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 MMRN1Q13201 1228 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 CRHR2Q13324 411 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 SCARF1Q14162 830 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 MTHFSDQ2M296 383 aaKnown RBP4.44□□□□□ -1.7
CHD1-211ENST00000514344 CRAMP1Q96RY5 1269 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 POLR3GLQ9BT43 218 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 NR2E3Q9Y5X4 410 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 ERBB4Q15303 1308 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 IGF2BP3O00425 579 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD1-211ENST00000514344 ALDH1A1P00352 501 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 PTPN12Q05209 780 aaKnown RBP4.44□□□□□ -1.7
CHD1-211ENST00000514344 DOK7Q18PE1 504 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 IFNL1Q8IU54 200 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 CFHR5Q9BXR6 569 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 NYXQ9GZU5 481 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 VPS33BQ9H267 617 aa4.44□□□□□ -1.7
CHD1-211ENST00000514344 ABCC4O15439 1325 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 KIF7Q2M1P5 1343 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 LAMB4A4D0S4 1761 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 PLA2G5P39877 138 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 SP3Q02447 781 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 MTFR1Q15390 333 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 WASHC4Q2M389 1173 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 SHISA4Q96DD7 197 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 FAM122AQ96E09 287 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 RTFDC1Q9BY42 306 aaPredicted RBP4.43□□□□□ -1.7
CHD1-211ENST00000514344 ZNF609O15014 1411 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 CACNA1AO00555 2505 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 NBPF26B4DH59 902 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 NBPF10Q6P3W6 841 aaKnown RBP4.43□□□□□ -1.7
CHD1-211ENST00000514344 ZNF428Q96B54 188 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 HTATIP2Q9BUP3 242 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 UBN2Q6ZU65 1347 aa4.43□□□□□ -1.7
CHD1-211ENST00000514344 RTL9Q8NET4 1388 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 TMEM265A0A087WTH1 108 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 A0A1W2PPC1 479 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 ECE2O60344 883 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 EVI5O60447 810 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 SUSD4Q5VX71 490 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 SPRYD7Q5W111 196 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 NLRP3Q96P20 1036 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 NSFL1CQ9UNZ2 370 aaKnown RBP4.42□□□□□ -1.7
CHD1-211ENST00000514344 RIC1Q4ADV7 1423 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 TAF1P21675 1872 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 C6orf229H3BNL8 230 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 ZBTB7BO15156 539 aaPredicted RBP4.42□□□□□ -1.7
CHD1-211ENST00000514344 RPS12P25398 132 aaKnown RBP4.42□□□□□ -1.7
CHD1-211ENST00000514344 NF2P35240 595 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 BCAMP50895 628 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 IL17REQ8NFR9 667 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 ZBTB3Q9H5J0 574 aa4.42□□□□□ -1.7
CHD1-211ENST00000514344 ANGEL1Q9UNK9 670 aaKnown RBP4.42□□□□□ -1.7
CHD1-211ENST00000514344 BTBD11A6QL63 1104 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 NBPF9Q3BBW0 867 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SP8Q8IXZ3 490 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
CHD1-211ENST00000514344 IL13P35225 146 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SLC10A4Q96EP9 437 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 ARHGAP39Q9C0H5 1083 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 MYOZ2Q9NPC6 264 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 DUOX1Q9NRD9 1551 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 IRS2Q9Y4H2 1338 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SPDYE2BA6NHP3 402 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 G3V3G9 751 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SPDYE6P0CI01 402 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SPDYE2Q495Y8 402 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 DCAF8Q5TAQ9 597 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 ARMC9Q7Z3E5 817 aa4.41□□□□□ -1.7
CHD1-211ENST00000514344 SCN9AQ15858 1988 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 RPTORQ8N122 1335 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 ZSWIM8A7E2V4 1837 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 C5orf42Q9H799 3197 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 PIEZO1Q92508 2521 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 RGL2O15211 777 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 BBOX1O75936 387 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 NTSR2O95665 410 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms