RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 RASGRP4Q8TDF6 673 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 ZSWIM4Q9H7M6 989 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 LATS2Q9NRM7 1088 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 PPM1HQ9ULR3 514 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 KCNH4Q9UQ05 1017 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 DYRK1BQ9Y463 629 aa7.43□□□□□ -1.22
CALCOCO2-222ENST00000514006 PPM1GO15355 546 aaPredicted RBP7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 KCNQ4P56696 695 aa7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 EFHC2Q5JST6 749 aa7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 GAS2L1Q99501 681 aaPredicted RBP7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 OXCT2Q9BYC2 517 aaPredicted RBP7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 OSBPL2Q9H1P3 480 aa7.42□□□□□ -1.22
CALCOCO2-222ENST00000514006 TLDC2A0PJX2 215 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 CCINQ13939 588 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 PEAR1Q5VY43 1037 aaPredicted RBP7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 DTHD1Q6ZMT9 781 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 SEC16BQ96JE7 1060 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 LIN7BQ9HAP6 207 aa7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 SOS2Q07890 1332 aaPredicted RBP7.41□□□□□ -1.22
CALCOCO2-222ENST00000514006 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 MINDY4BA8MYZ0 360 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 MMP20O60882 483 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 SSBP05455 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 RARAP10276 462 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 RLBP1P12271 317 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 CKAP2LQ8IYA6 745 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 TMEM74Q96NL1 305 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 PIF1Q9H611 641 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 ADAMTS1Q9UHI8 967 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 SALL4Q9UJQ4 1053 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
CALCOCO2-222ENST00000514006 ANKRD62A6NC57 917 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 F6X3S4 739 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 EIF4A3P38919 411 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 SFSWAPQ12872 951 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 FIGNL1Q6PIW4 674 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 ANKRD24Q8TF21 1146 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 PNMA5Q96PV4 448 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 TRIM56Q9BRZ2 755 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 GSX2Q9BZM3 304 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.39□□□□□ -1.23
CALCOCO2-222ENST00000514006 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 FBXO24O75426 580 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 BMP1P13497 986 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 MAP3K10Q02779 954 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 CTC1Q2NKJ3 1217 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 NCAPG2Q86XI2 1143 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZFYVE1Q9HBF4 777 aa7.38□□□□□ -1.23
CALCOCO2-222ENST00000514006 KHNYNO15037 678 aaKnown RBP7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 EFSO43281 561 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 PSAPP07602 524 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 NASPP49321 788 aaPredicted RBP7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 NFE2L2Q16236 605 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZNF296Q8WUU4 475 aaPredicted RBP7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 TCF12Q99081 682 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZFATQ9P243 1243 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 EFR3BQ9Y2G0 817 aa7.37□□□□□ -1.23
CALCOCO2-222ENST00000514006 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 SOX18P35713 384 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 HYAL2Q12891 473 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.231e-7■■■■□ 23
CALCOCO2-222ENST00000514006 NBPF6Q5VWK0 638 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 SDE2Q6IQ49 451 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 CCNJLQ8IV13 435 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 EAF1Q96JC9 268 aaPredicted RBP7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 NBPF4Q96M43 638 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 OSMRQ99650 979 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZKSCAN3Q9BRR0 538 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 CEP44Q9C0F1 390 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 STRIP2Q9ULQ0 834 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 SUPT16HQ9Y5B9 1047 aaKnown RBP7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
CALCOCO2-222ENST00000514006 KIF4AO95239 1232 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 NFKB1P19838 968 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 LIG3P49916 1009 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 PLAURQ03405 335 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 LAMC2Q13753 1193 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 RIPOR1Q6ZS17 1223 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 TRIM46Q7Z4K8 759 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 PHC3Q8NDX5 983 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 RHOVQ96L33 236 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 CNTNAP3BQ96NU0 1288 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms