RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 EPHX2P34913 555 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 EPS15P42566 896 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 SCNN1DP51172 638 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
HERC4-214ENST00000513996 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 PLA2G12BQ9BX93 195 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 HACL1Q9UJ83 578 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 ZNRF3Q9ULT6 936 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 CACNA1FO60840 1977 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 RAD17O75943 681 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 CSF1RP07333 972 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 DIEXFQ68CQ4 756 aaKnown RBP11.12□□□□□ -0.63
HERC4-214ENST00000513996 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 ANKRD18AQ8IVF6 992 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
HERC4-214ENST00000513996 PODXL2Q9NZ53 605 aa11.12□□□□□ -0.63
HERC4-214ENST00000513996 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
HERC4-214ENST00000513996 FOXO4P98177 505 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
HERC4-214ENST00000513996 EPHA10Q5JZY3 1008 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
HERC4-214ENST00000513996 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 LTBP1Q14766 1721 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 SHTN1A0MZ66 631 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 UFL1O94874 794 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
HERC4-214ENST00000513996 FAM161AQ3B820 660 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
HERC4-214ENST00000513996 BCL2L13Q9BXK5 485 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 BSDC1Q9NW68 430 aaPredicted RBP11.1□□□□□ -0.63
HERC4-214ENST00000513996 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 MINPP1Q9UNW1 487 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 RTL9Q8NET4 1388 aa11.1□□□□□ -0.63
HERC4-214ENST00000513996 SCN4AP35499 1836 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 PSMD14O00487 310 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 ALDH1L1O75891 902 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 ITGA6P23229 1130 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 MAP1SQ66K74 1059 aaPredicted RBP11.09□□□□□ -0.63
HERC4-214ENST00000513996 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
HERC4-214ENST00000513996 GRM8O00222 908 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 ECE2O60344 883 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 ATP2B4P23634 1241 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 HIRAP54198 1017 aaPredicted RBP11.08□□□□□ -0.64
HERC4-214ENST00000513996 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.64
HERC4-214ENST00000513996 TNIP1Q15025 636 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
HERC4-214ENST00000513996 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
HERC4-214ENST00000513996 KAZALD1Q96I82 304 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 EYA3Q99504 573 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 ZC3H12CQ9C0D7 883 aaKnown RBP11.08□□□□□ -0.64
HERC4-214ENST00000513996 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
HERC4-214ENST00000513996 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
HERC4-214ENST00000513996 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
HERC4-214ENST00000513996 ALDH1L2Q3SY69 923 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 KLRG1Q96E93 195 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 SUCLG2Q96I99 432 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
HERC4-214ENST00000513996 XDHP47989 1333 aa11.07□□□□□ -0.64
HERC4-214ENST00000513996 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
HERC4-214ENST00000513996 SNAP23O00161 211 aa11.06□□□□□ -0.64
HERC4-214ENST00000513996 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 IGHMBP2P38935 993 aaKnown RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 USP50Q70EL3 339 aaPredicted RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
HERC4-214ENST00000513996 DPF2Q92785 391 aa11.06□□□□□ -0.64
HERC4-214ENST00000513996 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 ADARB2Q9NS39 739 aaKnown RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 C9orf78Q9NZ63 289 aaPredicted RBP11.06□□□□□ -0.64
HERC4-214ENST00000513996 UTYO14607 1347 aa11.06□□□□□ -0.64
HERC4-214ENST00000513996 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 EGFRP00533 1210 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 KLRK1P26718 216 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 CHRNDQ07001 517 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
HERC4-214ENST00000513996 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 PGAP2Q9UHJ9 254 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 MYH3P11055 1940 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms