RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 ZNF784Q8NCA9 323 aaPredicted RBP10.33□□□□□ -0.76
NEDD4-210ENST00000513957 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 BCL2L13Q9BXK5 485 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 RTFDC1Q9BY42 306 aaPredicted RBP10.33□□□□□ -0.76
NEDD4-210ENST00000513957 DUOX1Q9NRD9 1551 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 STK25O00506 426 aa10.32□□□□□ -0.76
NEDD4-210ENST00000513957 CSF1RP07333 972 aa10.32□□□□□ -0.76
NEDD4-210ENST00000513957 ANKRD18AQ8IVF6 992 aa10.32□□□□□ -0.76
NEDD4-210ENST00000513957 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
NEDD4-210ENST00000513957 COL4A1P02462 1669 aa10.31□□□□□ -0.76
NEDD4-210ENST00000513957 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
NEDD4-210ENST00000513957 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
NEDD4-210ENST00000513957 DPP8Q6V1X1 898 aaPredicted RBP10.31□□□□□ -0.76
NEDD4-210ENST00000513957 ATF7IPQ6VMQ6 1270 aa10.31□□□□□ -0.76
NEDD4-210ENST00000513957 CELF1Q92879 486 aaKnown RBP10.31□□□□□ -0.76
NEDD4-210ENST00000513957 GPBP1L1Q9HC44 474 aaPredicted RBP10.31□□□□□ -0.76
NEDD4-210ENST00000513957 NOB1Q9ULX3 412 aaKnown RBP10.31□□□□□ -0.76
NEDD4-210ENST00000513957 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 IGHMBP2P38935 993 aaKnown RBP10.3□□□□□ -0.76
NEDD4-210ENST00000513957 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 MPNDQ8N594 471 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 JDP2Q8WYK2 163 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 GREM2Q9H772 168 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 BSDC1Q9NW68 430 aaPredicted RBP10.3□□□□□ -0.76
NEDD4-210ENST00000513957 XDHP47989 1333 aa10.3□□□□□ -0.76
NEDD4-210ENST00000513957 ANKRD18BA2A2Z9 1011 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 GLTPD2A6NH11 291 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 MS4A1P11836 297 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 TRIM27P14373 513 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 ITGA6P23229 1130 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 PRELPP51888 382 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 FOXO4P98177 505 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 KIAA2012Q0VF49 1180 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 IFIT5Q13325 482 aaKnown RBP10.29□□□□□ -0.76
NEDD4-210ENST00000513957 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-210ENST00000513957 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
NEDD4-210ENST00000513957 EYA3Q99504 573 aa10.29□□□□□ -0.76
NEDD4-210ENST00000513957 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-210ENST00000513957 FZD9O00144 591 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 NBPF7P0C2Y1 421 aaPredicted RBP10.28□□□□□ -0.76
NEDD4-210ENST00000513957 CCDC57Q2TAC2 916 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 OLFM4Q6UX06 510 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 JARID2Q92833 1246 aaPredicted RBP10.28□□□□□ -0.76
NEDD4-210ENST00000513957 MPHOSPH8Q99549 860 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 SEC31BQ9NQW1 1179 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
NEDD4-210ENST00000513957 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 BCAR3O75815 825 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 GNAI3P08754 354 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 UBTFL1P0CB47 393 aaPredicted RBP10.27□□□□□ -0.77
NEDD4-210ENST00000513957 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 LMBR1LQ6UX01 489 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 LARGE2Q8N3Y3 721 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 SUCLG2Q96I99 432 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 L3MBTL3Q96JM7 780 aaPredicted RBP10.27□□□□□ -0.77
NEDD4-210ENST00000513957 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 ANKIB1Q9P2G1 1089 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 GGA1Q9UJY5 639 aa10.27□□□□□ -0.77
NEDD4-210ENST00000513957 NSFL1CQ9UNZ2 370 aaKnown RBP10.27□□□□□ -0.77
NEDD4-210ENST00000513957 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 ZNF609O15014 1411 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 COL4A5P29400 1685 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 IQCA1LA6NCM1 817 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 FTSJ3Q8IY81 847 aaKnown RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 GPC2Q8N158 579 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 FRAT1Q92837 279 aaPredicted RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 KAZALD1Q96I82 304 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 BICC1Q9H694 974 aaKnown RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 MINPP1Q9UNW1 487 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 LEMD3Q9Y2U8 911 aa10.26□□□□□ -0.77
NEDD4-210ENST00000513957 ZNF646O15015 1829 aaPredicted RBP10.26□□□□□ -0.77
NEDD4-210ENST00000513957 MYH13Q9UKX3 1938 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 HAX1O00165 279 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 GPSM2P81274 684 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 AOC3Q16853 763 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 TAF7LQ5H9L4 462 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 TBC1D16Q8TBP0 767 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 SCN9AQ15858 1988 aa10.25□□□□□ -0.77
NEDD4-210ENST00000513957 ARAP2Q8WZ64 1704 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 C6orf229H3BNL8 230 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 UFL1O94874 794 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
NEDD4-210ENST00000513957 EPHA10Q5JZY3 1008 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 LDHAL6AQ6ZMR3 332 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 DZIP1LQ8IYY4 767 aaKnown RBP10.24□□□□□ -0.77
NEDD4-210ENST00000513957 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms