RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 PHLDB3Q6NSJ2 640 aa6.36□□□□□ -1.39
PROM1-216ENST00000513946 WFDC8Q8IUA0 241 aa6.36□□□□□ -1.39
PROM1-216ENST00000513946 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
PROM1-216ENST00000513946 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
PROM1-216ENST00000513946 NRG1Q02297 640 aaPredicted RBP6.35□□□□□ -1.39
PROM1-216ENST00000513946 ADAMTSL4Q6UY14 1074 aa6.35□□□□□ -1.39
PROM1-216ENST00000513946 TXNRD3Q86VQ6 643 aa6.35□□□□□ -1.39
PROM1-216ENST00000513946 NSUN5Q96P11 429 aaKnown RBP6.35□□□□□ -1.39
PROM1-216ENST00000513946 DLL1O00548 723 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 TM4SF5O14894 197 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 DYRK3O43781 588 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 KIF4AO95239 1232 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 EIF2AK2P19525 551 aaKnown RBP6.34□□□□□ -1.39
PROM1-216ENST00000513946 IGF2-ASQ6U949 168 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 XKR5Q6UX68 686 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 ATCAYQ86WG3 371 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 ABTB2Q8N961 1025 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 GGNBP2Q9H3C7 697 aa6.34□□□□□ -1.39
PROM1-216ENST00000513946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.34□□□□□ -1.39
PROM1-216ENST00000513946 CARNS1A5YM72 827 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 GHRHP01286 108 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
PROM1-216ENST00000513946 NPR3P17342 541 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 SETDB1Q15047 1291 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 NUDT16Q96DE0 195 aaKnown RBP6.33□□□□□ -1.4
PROM1-216ENST00000513946 CNTN3Q9P232 1028 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 TRIM33Q9UPN9 1127 aa6.33□□□□□ -1.4
PROM1-216ENST00000513946 FNDC3AQ9Y2H6 1198 aaKnown RBP6.33□□□□□ -1.4
PROM1-216ENST00000513946 H2AFB1P0C5Y9 115 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 H2AFB2P0C5Z0 115 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 NOS3P29474 1203 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
PROM1-216ENST00000513946 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
PROM1-216ENST00000513946 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
PROM1-216ENST00000513946 IL22RA1Q8N6P7 574 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 CEP120Q8N960 986 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 TMEM63CQ9P1W3 806 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
PROM1-216ENST00000513946 TTC39BQ5VTQ0 682 aaPredicted RBP6.31□□□□□ -1.4
PROM1-216ENST00000513946 PDE12Q6L8Q7 609 aaKnown RBP6.31□□□□□ -1.4
PROM1-216ENST00000513946 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
PROM1-216ENST00000513946 Q8N3U1 123 aa6.31□□□□□ -1.4
PROM1-216ENST00000513946 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
PROM1-216ENST00000513946 ELP3Q9H9T3 547 aa6.31□□□□□ -1.4
PROM1-216ENST00000513946 ABI2Q9NYB9 513 aaPredicted RBP6.31□□□□□ -1.4
PROM1-216ENST00000513946 NFKBIEO00221 500 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
PROM1-216ENST00000513946 ATP11AP98196 1134 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 HYAL2Q12891 473 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
PROM1-216ENST00000513946 CACTIN-AS1Q8N1I8 211 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 EDEM1Q92611 657 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 USP21Q9UK80 565 aa6.3□□□□□ -1.4
PROM1-216ENST00000513946 PDGFAP04085 211 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 MPSTP25325 297 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
PROM1-216ENST00000513946 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 DZIP1LQ8IYY4 767 aaKnown RBP6.29□□□□□ -1.4
PROM1-216ENST00000513946 C1orf127Q8N9H9 656 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 MEGF10Q96KG7 1140 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 RASSF4Q9H2L5 321 aa6.29□□□□□ -1.4
PROM1-216ENST00000513946 A6NHS1 94 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 ALX3O95076 343 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 MZF1P28698 734 aaPredicted RBP6.28□□□□□ -1.4
PROM1-216ENST00000513946 MTMR3Q13615 1198 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 CEP135Q66GS9 1140 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 TP53INP1Q96A56 240 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
PROM1-216ENST00000513946 PBX4Q9BYU1 374 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 ADAM19Q9H013 955 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 CHRDQ9H2X0 955 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
PROM1-216ENST00000513946 F8W735 103 aaPredicted RBP6.27□□□□□ -1.41
PROM1-216ENST00000513946 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
PROM1-216ENST00000513946 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
PROM1-216ENST00000513946 DNM1Q05193 864 aaKnown RBP6.27□□□□□ -1.41
PROM1-216ENST00000513946 ECM1Q16610 540 aa6.27□□□□□ -1.41
PROM1-216ENST00000513946 C14orf37Q86TY3 774 aa6.27□□□□□ -1.41
PROM1-216ENST00000513946 MUC3BQ9H195 1237 aa6.27□□□□□ -1.41
PROM1-216ENST00000513946 SRA1Q9HD15 236 aaKnown RBP6.27□□□□□ -1.41
PROM1-216ENST00000513946 ACPPP15309 386 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 ZNF438Q7Z4V0 828 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 MAP4K3Q8IVH8 894 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 SPACA7Q96KW9 195 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 LACRTQ9GZZ8 138 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 MRPL18Q9H0U6 180 aaKnown RBP6.26□□□□□ -1.41
PROM1-216ENST00000513946 KCNK4Q9NYG8 393 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 POLIQ9UNA4 740 aa6.26□□□□□ -1.41
PROM1-216ENST00000513946 FZD6O60353 706 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 CDC27P30260 824 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 FKBP4Q02790 459 aaKnown RBP eCLIP6.25□□□□□ -1.41
PROM1-216ENST00000513946 ZMYM1Q5SVZ6 1142 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 ALKBH2Q6NS38 261 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 Q6ZS46 218 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 AKTIPQ9H8T0 292 aa6.25□□□□□ -1.41
PROM1-216ENST00000513946 SH2B1Q9NRF2 756 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms