RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
PDGFC-209ENST00000513664 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
PDGFC-209ENST00000513664 TAF1P21675 1872 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
PDGFC-209ENST00000513664 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 OLFM4Q6UX06 510 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
PDGFC-209ENST00000513664 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
PDGFC-209ENST00000513664 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
PDGFC-209ENST00000513664 GPSM2P81274 684 aa11.8□□□□□ -0.52
PDGFC-209ENST00000513664 ZNF277Q9NRM2 450 aaPredicted RBP11.8□□□□□ -0.52
PDGFC-209ENST00000513664 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 SBF1O95248 1867 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 COL4A1P02462 1669 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 CIAO1O76071 339 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 YY1P25490 414 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 KCNJ4P48050 445 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-209ENST00000513664 CHRNDQ07001 517 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 KIAA2012Q0VF49 1180 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 AAMPQ13685 434 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-209ENST00000513664 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-209ENST00000513664 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
PDGFC-209ENST00000513664 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 LTBP1Q14766 1721 aa11.79□□□□□ -0.52
PDGFC-209ENST00000513664 EYA2O00167 538 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 HMMRO75330 724 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 UFL1O94874 794 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
PDGFC-209ENST00000513664 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 POLLQ9UGP5 575 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
PDGFC-209ENST00000513664 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
PDGFC-209ENST00000513664 DUOX1Q9NRD9 1551 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 G3V3G9 751 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
PDGFC-209ENST00000513664 AOC3Q16853 763 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 ZNF804BA4D1E1 1349 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 TIAM2Q8IVF5 1701 aa11.77□□□□□ -0.53
PDGFC-209ENST00000513664 PDE8BO95263 885 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 PRELPP51888 382 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 EIF6P56537 245 aaKnown RBP11.76□□□□□ -0.53
PDGFC-209ENST00000513664 UBE4AQ14139 1066 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 POLA2Q14181 598 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
PDGFC-209ENST00000513664 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
PDGFC-209ENST00000513664 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 FZD9O00144 591 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFC-209ENST00000513664 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 PUS3Q9BZE2 481 aaKnown RBP11.75□□□□□ -0.53
PDGFC-209ENST00000513664 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
PDGFC-209ENST00000513664 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
PDGFC-209ENST00000513664 GLTPD2A6NH11 291 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 RIMBP2O15034 1052 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 TAF5LO75529 589 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 TNIP1Q15025 636 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
PDGFC-209ENST00000513664 ATG9AQ7Z3C6 839 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 LPIN2Q92539 896 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 SIL1Q9H173 461 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
PDGFC-209ENST00000513664 CENPBP07199 599 aaPredicted RBP11.73□□□□□ -0.53
PDGFC-209ENST00000513664 IFIT1P09914 478 aaKnown RBP11.73□□□□□ -0.53
PDGFC-209ENST00000513664 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
PDGFC-209ENST00000513664 CAVIN4Q5BKX8 364 aa11.73□□□□□ -0.53
PDGFC-209ENST00000513664 ZNF804AQ7Z570 1209 aa11.73□□□□□ -0.53
PDGFC-209ENST00000513664 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
PDGFC-209ENST00000513664 GPC2Q8N158 579 aa11.73□□□□□ -0.53
PDGFC-209ENST00000513664 VGLL2Q8N8G2 317 aa11.73□□□□□ -0.53
PDGFC-209ENST00000513664 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
PDGFC-209ENST00000513664 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
PDGFC-209ENST00000513664 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms