RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 MLLT1Q03111 559 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-212ENST00000513538 NOGQ13253 232 aa12.58□□□□□ -0.4
TCOF1-212ENST00000513538 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
TCOF1-212ENST00000513538 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
TCOF1-212ENST00000513538 TBC1D16Q8TBP0 767 aa12.58□□□□□ -0.4
TCOF1-212ENST00000513538 GBA2Q9HCG7 927 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-212ENST00000513538 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
TCOF1-212ENST00000513538 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-212ENST00000513538 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
TCOF1-212ENST00000513538 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
TCOF1-212ENST00000513538 DGKZQ13574 1117 aa12.57□□□□□ -0.4
TCOF1-212ENST00000513538 RGMBQ6NW40 437 aa12.57□□□□□ -0.4
TCOF1-212ENST00000513538 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
TCOF1-212ENST00000513538 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
TCOF1-212ENST00000513538 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
TCOF1-212ENST00000513538 ZNF609O15014 1411 aa12.56□□□□□ -0.4
TCOF1-212ENST00000513538 RPS8P62241 208 aaKnown RBP12.56□□□□□ -0.4
TCOF1-212ENST00000513538 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
TCOF1-212ENST00000513538 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
TCOF1-212ENST00000513538 GGA3Q9NZ52 723 aa12.56□□□□□ -0.4
TCOF1-212ENST00000513538 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
TCOF1-212ENST00000513538 UFL1O94874 794 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
TCOF1-212ENST00000513538 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-212ENST00000513538 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-212ENST00000513538 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 EYA3Q99504 573 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
TCOF1-212ENST00000513538 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
TCOF1-212ENST00000513538 MYH3P11055 1940 aa12.54□□□□□ -0.4
TCOF1-212ENST00000513538 PAPPA2Q9BXP8 1791 aa12.54□□□□□ -0.4
TCOF1-212ENST00000513538 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-212ENST00000513538 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
TCOF1-212ENST00000513538 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-212ENST00000513538 WTIPA6NIX2 430 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-212ENST00000513538 SLC10A3P09131 477 aa12.53□□□□□ -0.4
TCOF1-212ENST00000513538 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-212ENST00000513538 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
TCOF1-212ENST00000513538 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
TCOF1-212ENST00000513538 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
TCOF1-212ENST00000513538 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
TCOF1-212ENST00000513538 MYD88Q99836 296 aa12.53□□□□□ -0.4
TCOF1-212ENST00000513538 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
TCOF1-212ENST00000513538 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 SULF1Q8IWU6 871 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 GMLQ99445 158 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 ZC3H12CQ9C0D7 883 aaKnown RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 SCAF8Q9UPN6 1271 aaKnown RBP12.52□□□□□ -0.41
TCOF1-212ENST00000513538 PDE4DIPQ5VU43 2346 aa12.52□□□□□ -0.41
TCOF1-212ENST00000513538 TRPA1O75762 1119 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-212ENST00000513538 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 SCARF1Q14162 830 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
TCOF1-212ENST00000513538 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 CSRNP1Q96S65 589 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 ANKIB1Q9P2G1 1089 aa12.51□□□□□ -0.41
TCOF1-212ENST00000513538 TNRC18O15417 2968 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-212ENST00000513538 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
TCOF1-212ENST00000513538 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
TCOF1-212ENST00000513538 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
TCOF1-212ENST00000513538 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
TCOF1-212ENST00000513538 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
TCOF1-212ENST00000513538 XDHP47989 1333 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 APAF1O14727 1248 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 PDE8AO60658 829 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 SOX10P56693 466 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-212ENST00000513538 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-212ENST00000513538 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 MYOZ2Q9NPC6 264 aa12.49□□□□□ -0.41
TCOF1-212ENST00000513538 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-212ENST00000513538 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
TCOF1-212ENST00000513538 USP17L8P0C7I0 530 aa12.48□□□□□ -0.41
TCOF1-212ENST00000513538 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
TCOF1-212ENST00000513538 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
TCOF1-212ENST00000513538 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
TCOF1-212ENST00000513538 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 PITPNM2Q9BZ72 1349 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 G3V3G9 751 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 ATP2B4P23634 1241 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 CTSWP56202 376 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 GNAI1P63096 354 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 GREM2Q9H772 168 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms