RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
CCL28-203ENST00000513525 VPS33BQ9H267 617 aa12.69□□□□□ -0.38
CCL28-203ENST00000513525 BBOX1O75936 387 aa12.68□□□□□ -0.38
CCL28-203ENST00000513525 HTRA3P83110 453 aa12.68□□□□□ -0.38
CCL28-203ENST00000513525 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
CCL28-203ENST00000513525 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
CCL28-203ENST00000513525 TAF1DQ9H5J8 278 aaPredicted RBP12.68□□□□□ -0.38
CCL28-203ENST00000513525 COL4A1P02462 1669 aa12.68□□□□□ -0.38
CCL28-203ENST00000513525 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 FAM205CA6NFA0 338 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 EIF6P56537 245 aaKnown RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 GRAPQ13588 217 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
CCL28-203ENST00000513525 GRAPLQ8TC17 118 aaPredicted RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
CCL28-203ENST00000513525 IL16Q14005 1332 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
CCL28-203ENST00000513525 NEFLP07196 543 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 SF3B3Q15393 1217 aaKnown RBP12.66□□□□□ -0.38
CCL28-203ENST00000513525 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 SUPT20HQ8NEM7 779 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 FAM89AQ96GI7 184 aa12.66□□□□□ -0.38
CCL28-203ENST00000513525 PPIP5K2O43314 1243 aa12.65□□□□□ -0.38
CCL28-203ENST00000513525 EPHX2P34913 555 aa12.65□□□□□ -0.38
CCL28-203ENST00000513525 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
CCL28-203ENST00000513525 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
CCL28-203ENST00000513525 AOC3Q16853 763 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 DPP8Q6V1X1 898 aaPredicted RBP12.64□□□□□ -0.39
CCL28-203ENST00000513525 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 MPNDQ8N594 471 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
CCL28-203ENST00000513525 CCDC191Q8NCU4 936 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
CCL28-203ENST00000513525 SCN9AQ15858 1988 aa12.64□□□□□ -0.39
CCL28-203ENST00000513525 G3V3G9 751 aa12.63□□□□□ -0.39
CCL28-203ENST00000513525 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
CCL28-203ENST00000513525 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
CCL28-203ENST00000513525 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
CCL28-203ENST00000513525 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
CCL28-203ENST00000513525 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
CCL28-203ENST00000513525 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
CCL28-203ENST00000513525 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 SCNN1DP51172 638 aa12.62□□□□□ -0.39
CCL28-203ENST00000513525 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
CCL28-203ENST00000513525 MYD88Q99836 296 aa12.62□□□□□ -0.39
CCL28-203ENST00000513525 METTL22Q9BUU2 404 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
CCL28-203ENST00000513525 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
CCL28-203ENST00000513525 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
CCL28-203ENST00000513525 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
CCL28-203ENST00000513525 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
CCL28-203ENST00000513525 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
CCL28-203ENST00000513525 PSEN1P49768 467 aa12.61□□□□□ -0.39
CCL28-203ENST00000513525 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
CCL28-203ENST00000513525 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
CCL28-203ENST00000513525 STK31Q9BXU1 1019 aa12.61□□□□□ -0.39
CCL28-203ENST00000513525 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
CCL28-203ENST00000513525 CXCL9Q07325 125 aa12.6□□□□□ -0.39
CCL28-203ENST00000513525 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
CCL28-203ENST00000513525 WDR63Q8IWG1 891 aa12.6□□□□□ -0.39
CCL28-203ENST00000513525 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
CCL28-203ENST00000513525 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
CCL28-203ENST00000513525 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 PDE8AO60658 829 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 EPS15P42566 896 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
CCL28-203ENST00000513525 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
CCL28-203ENST00000513525 RPS8P62241 208 aaKnown RBP12.58□□□□□ -0.4
CCL28-203ENST00000513525 CCDC152Q4G0S7 254 aa12.58□□□□□ -0.4
CCL28-203ENST00000513525 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
CCL28-203ENST00000513525 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
CCL28-203ENST00000513525 TMEM88BA6NKF7 163 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 YDJCA8MPS7 323 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 NEXNQ0ZGT2 675 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 TNIP1Q15025 636 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms