RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 SCN9AQ15858 1988 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 SHTN1A0MZ66 631 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 TRAF5O00463 557 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 VAMP4O75379 141 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 UFL1O94874 794 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 TTLL11Q8NHH1 800 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 CNOT7Q9UIV1 285 aaKnown RBP21.52■■□□□ 1.04
MATR3-220ENST00000512876 MYH3P11055 1940 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 CACNA1FO60840 1977 aa21.52■■□□□ 1.04
MATR3-220ENST00000512876 TRPM7Q96QT4 1865 aa21.52■■□□□ 1.03
MATR3-220ENST00000512876 THSD7BQ9C0I4 1608 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 H7C1W4 665 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 CST9Q5W186 159 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 ANKRD18AQ8IVF6 992 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 MICALL2Q8IY33 904 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
MATR3-220ENST00000512876 ANKIB1Q9P2G1 1089 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 GGA1Q9UJY5 639 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 ZBTB12Q9Y330 459 aaPredicted RBP21.51■■□□□ 1.03
MATR3-220ENST00000512876 ZNF609O15014 1411 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 XDHP47989 1333 aa21.51■■□□□ 1.03
MATR3-220ENST00000512876 RPS12P25398 132 aaKnown RBP21.5■■□□□ 1.03
MATR3-220ENST00000512876 EXOSC9Q06265 439 aaKnown RBP21.5■■□□□ 1.03
MATR3-220ENST00000512876 DOK7Q18PE1 504 aa21.5■■□□□ 1.03
MATR3-220ENST00000512876 DEFB115Q30KQ5 88 aa21.5■■□□□ 1.03
MATR3-220ENST00000512876 CDC5LQ99459 802 aaKnown RBP21.5■■□□□ 1.03
MATR3-220ENST00000512876 ZC3H12CQ9C0D7 883 aaKnown RBP21.5■■□□□ 1.03
MATR3-220ENST00000512876 KCNQ5Q9NR82 932 aa21.5■■□□□ 1.03
MATR3-220ENST00000512876 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
MATR3-220ENST00000512876 CASP7P55210 303 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 GCKRQ14397 625 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 UBE3BQ7Z3V4 1068 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 DNAAF4Q8WXU2 420 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 PLA2G12BQ9BX93 195 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
MATR3-220ENST00000512876 GREM2Q9H772 168 aa21.49■■□□□ 1.03
MATR3-220ENST00000512876 ABT1Q9ULW3 272 aaKnown RBP21.49■■□□□ 1.03
MATR3-220ENST00000512876 H7C1D1 291 aa21.48■■□□□ 1.03
MATR3-220ENST00000512876 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
MATR3-220ENST00000512876 BSDC1Q9NW68 430 aaPredicted RBP21.48■■□□□ 1.03
MATR3-220ENST00000512876 TLL2Q9Y6L7 1015 aa21.48■■□□□ 1.03
MATR3-220ENST00000512876 VIL1P09327 827 aaKnown RBP21.47■■□□□ 1.03
MATR3-220ENST00000512876 LINS1Q8NG48 757 aa21.47■■□□□ 1.03
MATR3-220ENST00000512876 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
MATR3-220ENST00000512876 PSME4Q14997 1843 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 FOXN1O15353 648 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 SAMD7Q7Z3H4 446 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 WBP1LQ9NX94 342 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 ZNF521Q96K83 1311 aa21.46■■□□□ 1.03
MATR3-220ENST00000512876 EGFRP00533 1210 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 ATP2B4P23634 1241 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 CDC37L1Q7L3B6 337 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 MINPP1Q9UNW1 487 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 MED23Q9ULK4 1368 aa21.45■■□□□ 1.02
MATR3-220ENST00000512876 SPEF2Q9C093 1822 aa21.44■■□□□ 1.02
MATR3-220ENST00000512876 TNS4Q8IZW8 715 aa21.44■■□□□ 1.02
MATR3-220ENST00000512876 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
MATR3-220ENST00000512876 CSF1RP07333 972 aa21.43■■□□□ 1.02
MATR3-220ENST00000512876 TBC1D10BQ4KMP7 808 aaPredicted RBP21.43■■□□□ 1.02
MATR3-220ENST00000512876 SAPCD2Q86UD0 394 aa21.43■■□□□ 1.02
MATR3-220ENST00000512876 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
MATR3-220ENST00000512876 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
MATR3-220ENST00000512876 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
MATR3-220ENST00000512876 PODNQ7Z5L7 613 aa21.42■■□□□ 1.02
MATR3-220ENST00000512876 HHIPL1Q96JK4 782 aa21.42■■□□□ 1.02
MATR3-220ENST00000512876 ITGA6P23229 1130 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 ECE1P42892 770 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 ZNF280AP59817 542 aaPredicted RBP21.41■■□□□ 1.02
MATR3-220ENST00000512876 BEND3Q5T5X7 828 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 CYP4F22Q6NT55 531 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 RSBN1LQ6PCB5 846 aaPredicted RBP21.41■■□□□ 1.02
MATR3-220ENST00000512876 AGBL3Q8NEM8 1001 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 AIDAQ96BJ3 306 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 GMLQ99445 158 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 PRDM10Q9NQV6 1147 aa21.41■■□□□ 1.02
MATR3-220ENST00000512876 F6X3S4 739 aa21.4■■□□□ 1.02
MATR3-220ENST00000512876 G3V3G9 751 aa21.4■■□□□ 1.02
MATR3-220ENST00000512876 IGHMBP2P38935 993 aaKnown RBP21.4■■□□□ 1.02
MATR3-220ENST00000512876 CTCFP49711 727 aaPredicted RBP21.4■■□□□ 1.02
MATR3-220ENST00000512876 CCT4P50991 539 aaKnown RBP21.4■■□□□ 1.02
MATR3-220ENST00000512876 KIF4BQ2VIQ3 1234 aa21.4■■□□□ 1.02
MATR3-220ENST00000512876 DCAF8Q5TAQ9 597 aa21.4■■□□□ 1.02
MATR3-220ENST00000512876 ZNF646O15015 1829 aaPredicted RBP21.4■■□□□ 1.02
MATR3-220ENST00000512876 MAP2K1Q02750 393 aaPredicted RBP21.39■■□□□ 1.01
MATR3-220ENST00000512876 USP48Q86UV5 1035 aa21.39■■□□□ 1.01
MATR3-220ENST00000512876 KRT26Q7Z3Y9 468 aa21.38■■□□□ 1.01
MATR3-220ENST00000512876 LEMD3Q9Y2U8 911 aa21.38■■□□□ 1.01
MATR3-220ENST00000512876 USP17L3A6NCW0 530 aa21.37■■□□□ 1.01
MATR3-220ENST00000512876 USP17L4A6NCW7 530 aa21.37■■□□□ 1.01
MATR3-220ENST00000512876 FOXO4P98177 505 aa21.37■■□□□ 1.01
MATR3-220ENST00000512876 RBM26Q5T8P6 1007 aaKnown RBP21.37■■□□□ 1.01
MATR3-220ENST00000512876 DLK2Q6UY11 383 aa21.37■■□□□ 1.01
MATR3-220ENST00000512876 PAXIP1Q6ZW49 1069 aaPredicted RBP21.37■■□□□ 1.01
MATR3-220ENST00000512876 USP17L1Q7RTZ2 530 aa21.37■■□□□ 1.01
MATR3-220ENST00000512876 TXNRD3Q86VQ6 643 aa21.36■■□□□ 1.01
MATR3-220ENST00000512876 DCPSQ96C86 337 aaKnown RBP21.36■■□□□ 1.01
MATR3-220ENST00000512876 ANKRD2Q9GZV1 360 aa21.36■■□□□ 1.01
MATR3-220ENST00000512876 ZNF408Q9H9D4 720 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms