RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 NLRP13Q86W25 1043 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 FBXO11Q86XK2 927 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 TTC9Q92623 222 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 PLD4Q96BZ4 506 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 LENG1Q96BZ8 264 aaPredicted RBP4.88□□□□□ -1.63
PDGFC-208ENST00000512711 FRRS1LQ9P0K9 344 aa4.88□□□□□ -1.63
PDGFC-208ENST00000512711 TMEM88BA6NKF7 163 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 C9orf172C9J069 976 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 DYRK3O43781 588 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 PTCD1O75127 700 aaKnown RBP4.87□□□□□ -1.63
PDGFC-208ENST00000512711 PSAPP07602 524 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 RAC1P63000 192 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 NRG1Q02297 640 aaPredicted RBP4.87□□□□□ -1.63
PDGFC-208ENST00000512711 MTMR3Q13615 1198 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 GDF6Q6KF10 455 aaPredicted RBP4.87□□□□□ -1.63
PDGFC-208ENST00000512711 PIK3R5Q8WYR1 880 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 ZFP64Q9NPA5 681 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 TRIM33Q9UPN9 1127 aa4.87□□□□□ -1.63
PDGFC-208ENST00000512711 ALX3O95076 343 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 PHLDB3Q6NSJ2 640 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 WFDC8Q8IUA0 241 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 IL22RA1Q8N6P7 574 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 GGNBP2Q9H3C7 697 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 CNTN3Q9P232 1028 aa4.86□□□□□ -1.63
PDGFC-208ENST00000512711 A6NHS1 94 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 SSFA2P28290 1259 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 IREB2P48200 963 aaKnown RBP4.85□□□□□ -1.63
PDGFC-208ENST00000512711 ATP11AP98196 1134 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 PRSS36Q5K4E3 855 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 OR13H1Q8NG92 308 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 WFDC12Q8WWY7 111 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 NUDT16Q96DE0 195 aaKnown RBP4.85□□□□□ -1.63
PDGFC-208ENST00000512711 NACC1Q96RE7 527 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 SSBP4Q9BWG4 385 aaPredicted RBP4.85□□□□□ -1.63
PDGFC-208ENST00000512711 TMEM63CQ9P1W3 806 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 USP21Q9UK80 565 aa4.85□□□□□ -1.63
PDGFC-208ENST00000512711 DLL1O00548 723 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 GHRHP01286 108 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 HOXD8P13378 290 aaPredicted RBP4.84□□□□□ -1.63
PDGFC-208ENST00000512711 NOS3P29474 1203 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 SOX18P35713 384 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 SETDB1Q15047 1291 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 TTC39BQ5VTQ0 682 aaPredicted RBP4.84□□□□□ -1.63
PDGFC-208ENST00000512711 TXNRD3Q86VQ6 643 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 GTF3C2Q8WUA4 911 aaPredicted RBP4.84□□□□□ -1.63
PDGFC-208ENST00000512711 RASSF4Q9H2L5 321 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 ELP3Q9H9T3 547 aa4.84□□□□□ -1.63
PDGFC-208ENST00000512711 TM4SF5O14894 197 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 TRPA1O75762 1119 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 ACPPP15309 386 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 ARID4AP29374 1257 aaPredicted RBP4.83□□□□□ -1.64
PDGFC-208ENST00000512711 CDC25BP30305 580 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 DNM1Q05193 864 aaKnown RBP4.83□□□□□ -1.64
PDGFC-208ENST00000512711 TXNDC11Q6PKC3 985 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 IGF2-ASQ6U949 168 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 NBPF11Q86T75 865 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 DTWD1Q8N5C7 304 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 CEP120Q8N960 986 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 GALNT11Q8NCW6 608 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 EDEM1Q92611 657 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 TP53INP1Q96A56 240 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 LACRTQ9GZZ8 138 aa4.83□□□□□ -1.64
PDGFC-208ENST00000512711 LINC01387J3KSC0 135 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 MPSTP25325 297 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 EIF1AXP47813 144 aaKnown RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 NOM1Q5C9Z4 860 aaKnown RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 CEP135Q66GS9 1140 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 HELQQ8TDG4 1101 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 MEGF10Q96KG7 1140 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 POP1Q99575 1024 aaKnown RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 ANO2Q9NQ90 1003 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 SH2B1Q9NRF2 756 aaPredicted RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 ABI2Q9NYB9 513 aaPredicted RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 KCNK4Q9NYG8 393 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 KANSL3Q9P2N6 904 aa4.82□□□□□ -1.64
PDGFC-208ENST00000512711 FNDC3AQ9Y2H6 1198 aaKnown RBP4.82□□□□□ -1.64
PDGFC-208ENST00000512711 KIF4AO95239 1232 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 PDGFAP04085 211 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 HYAL2Q12891 473 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 C8orf34Q49A92 452 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 C14orf37Q86TY3 774 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 AGGF1Q8N302 714 aaeCLIP4.81□□□□□ -1.64
PDGFC-208ENST00000512711 ABTB2Q8N961 1025 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 HHIPQ96QV1 700 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 FAM13BQ9NYF5 915 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 PPME1Q9Y570 386 aa4.81□□□□□ -1.64
PDGFC-208ENST00000512711 NFKBIEO00221 500 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 DDX3YO15523 660 aaKnown RBP4.8□□□□□ -1.64
PDGFC-208ENST00000512711 HYAL3O43820 417 aaPredicted RBP4.8□□□□□ -1.64
PDGFC-208ENST00000512711 PPP1R15AO75807 674 aaPredicted RBP4.8□□□□□ -1.64
PDGFC-208ENST00000512711 PDE12Q6L8Q7 609 aaKnown RBP4.8□□□□□ -1.64
PDGFC-208ENST00000512711 XKR5Q6UX68 686 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 ZNF438Q7Z4V0 828 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 NCAPG2Q86XI2 1143 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 PBX4Q9BYU1 374 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 CHRDQ9H2X0 955 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms