RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 DDX19BQ9UMR2 479 aa19.72■□□□□ 0.75
SGCA-208ENST00000512526 RIPOR2Q9Y4F9 1068 aa19.72■□□□□ 0.75
SGCA-208ENST00000512526 IARSP41252 1262 aaKnown RBP19.71■□□□□ 0.75
SGCA-208ENST00000512526 PTPN12Q05209 780 aaKnown RBP19.71■□□□□ 0.75
SGCA-208ENST00000512526 SUPT20HQ8NEM7 779 aa19.71■□□□□ 0.75
SGCA-208ENST00000512526 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
SGCA-208ENST00000512526 TBC1D16Q8TBP0 767 aa19.71■□□□□ 0.75
SGCA-208ENST00000512526 PUS3Q9BZE2 481 aaKnown RBP19.71■□□□□ 0.75
SGCA-208ENST00000512526 ANKIB1Q9P2G1 1089 aa19.71■□□□□ 0.75
SGCA-208ENST00000512526 WTIPA6NIX2 430 aaPredicted RBP19.7■□□□□ 0.74
SGCA-208ENST00000512526 CHRNDQ07001 517 aa19.7■□□□□ 0.74
SGCA-208ENST00000512526 XDHP47989 1333 aa19.7■□□□□ 0.74
SGCA-208ENST00000512526 TAF1P21675 1872 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 SRGAP3O43295 1099 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 ATP2B4P23634 1241 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 ANKRD2Q9GZV1 360 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 C1orf115Q9H7X2 142 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 CNNM1Q9NRU3 951 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 GGA1Q9UJY5 639 aa19.69■□□□□ 0.74
SGCA-208ENST00000512526 PNMA6EA0A0J9YXQ4 647 aa19.68■□□□□ 0.74
SGCA-208ENST00000512526 C6orf229H3BNL8 230 aa19.68■□□□□ 0.74
SGCA-208ENST00000512526 KIAA2012Q0VF49 1180 aa19.68■□□□□ 0.74
SGCA-208ENST00000512526 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
SGCA-208ENST00000512526 COPRSQ9NQ92 184 aa19.68■□□□□ 0.74
SGCA-208ENST00000512526 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
SGCA-208ENST00000512526 SUPT16HQ9Y5B9 1047 aaKnown RBP19.68■□□□□ 0.74
SGCA-208ENST00000512526 UFL1O94874 794 aa19.67■□□□□ 0.74
SGCA-208ENST00000512526 POLA2Q14181 598 aa19.67■□□□□ 0.74
SGCA-208ENST00000512526 AOC3Q16853 763 aa19.67■□□□□ 0.74
SGCA-208ENST00000512526 HELBQ8NG08 1087 aaPredicted RBP19.67■□□□□ 0.74
SGCA-208ENST00000512526 FBXO3Q9UK99 471 aa19.67■□□□□ 0.74
SGCA-208ENST00000512526 FER1L6Q2WGJ9 1857 aa19.67■□□□□ 0.74
SGCA-208ENST00000512526 EYA2O00167 538 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 PPIP5K2O43314 1243 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 TAF5LO75529 589 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 WASHC4Q2M389 1173 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 ATG9AQ7Z3C6 839 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 LARGE2Q8N3Y3 721 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
SGCA-208ENST00000512526 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
SGCA-208ENST00000512526 GPR101Q96P66 508 aaPredicted RBP19.66■□□□□ 0.74
SGCA-208ENST00000512526 PA2G4Q9UQ80 394 aaKnown RBP19.66■□□□□ 0.74
SGCA-208ENST00000512526 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
SGCA-208ENST00000512526 FZD9O00144 591 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 SNAP23O00161 211 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 CIAO1O76071 339 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 CEP85Q6P2H3 762 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 EYA3Q99504 573 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 DUOX1Q9NRD9 1551 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 LRRC37AA6NMS7 1700 aa19.65■□□□□ 0.74
SGCA-208ENST00000512526 MYH3P11055 1940 aa19.64■□□□□ 0.74
SGCA-208ENST00000512526 VGLL2Q8N8G2 317 aa19.64■□□□□ 0.73
SGCA-208ENST00000512526 JDP2Q8WYK2 163 aa19.64■□□□□ 0.73
SGCA-208ENST00000512526 ZC3H12CQ9C0D7 883 aaKnown RBP19.64■□□□□ 0.73
SGCA-208ENST00000512526 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
SGCA-208ENST00000512526 MROH5Q6ZUA9 1318 aa19.64■□□□□ 0.73
SGCA-208ENST00000512526 CACNA1SQ13698 1873 aa19.63■□□□□ 0.73
SGCA-208ENST00000512526 RIMBP2O15034 1052 aa19.63■□□□□ 0.73
SGCA-208ENST00000512526 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
SGCA-208ENST00000512526 IRS2Q9Y4H2 1338 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 PDE8BO95263 885 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 IL15P40933 162 aaPredicted RBP19.62■□□□□ 0.73
SGCA-208ENST00000512526 METTL24Q5JXM2 366 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 SIRT2Q8IXJ6 389 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 RPAP2Q8IXW5 612 aaPredicted RBP19.62■□□□□ 0.73
SGCA-208ENST00000512526 CRBNQ96SW2 442 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 SIL1Q9H173 461 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 COL4A5P29400 1685 aa19.62■□□□□ 0.73
SGCA-208ENST00000512526 UBE4AQ14139 1066 aa19.61■□□□□ 0.73
SGCA-208ENST00000512526 TXNRD3Q86VQ6 643 aa19.61■□□□□ 0.73
SGCA-208ENST00000512526 NIM1KQ8IY84 436 aa19.61■□□□□ 0.73
SGCA-208ENST00000512526 LTBP1Q14766 1721 aa19.61■□□□□ 0.73
SGCA-208ENST00000512526 GLTPD2A6NH11 291 aa19.6■□□□□ 0.73
SGCA-208ENST00000512526 YDJCA8MPS7 323 aa19.6■□□□□ 0.73
SGCA-208ENST00000512526 KLRK1P26718 216 aa19.6■□□□□ 0.73
SGCA-208ENST00000512526 DOK7Q18PE1 504 aa19.6■□□□□ 0.73
SGCA-208ENST00000512526 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
SGCA-208ENST00000512526 MED23Q9ULK4 1368 aa19.59■□□□□ 0.73
SGCA-208ENST00000512526 FGFR2P21802 821 aa19.59■□□□□ 0.73
SGCA-208ENST00000512526 KCNJ4P48050 445 aa19.59■□□□□ 0.73
SGCA-208ENST00000512526 CEP126Q9P2H0 1117 aa19.59■□□□□ 0.73
SGCA-208ENST00000512526 SBF1O95248 1867 aa19.58■□□□□ 0.73
SGCA-208ENST00000512526 CXCL9Q07325 125 aa19.58■□□□□ 0.72
SGCA-208ENST00000512526 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.72
SGCA-208ENST00000512526 DBNDD1Q9H9R9 158 aa19.58■□□□□ 0.72
SGCA-208ENST00000512526 ZNF541Q9H0D2 1346 aa19.57■□□□□ 0.72
SGCA-208ENST00000512526 EIF6P56537 245 aaKnown RBP19.57■□□□□ 0.72
SGCA-208ENST00000512526 G3BP1Q13283 466 aaKnown RBP eCLIP19.57■□□□□ 0.72
SGCA-208ENST00000512526 COA1Q9GZY4 146 aa19.57■□□□□ 0.72
SGCA-208ENST00000512526 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
SGCA-208ENST00000512526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.57■□□□□ 0.72
SGCA-208ENST00000512526 ECE2O60344 883 aa19.56■□□□□ 0.72
SGCA-208ENST00000512526 SURF6O75683 361 aaKnown RBP19.56■□□□□ 0.72
SGCA-208ENST00000512526 DDNO94850 711 aaPredicted RBP19.56■□□□□ 0.72
SGCA-208ENST00000512526 SASH1O94885 1247 aa19.56■□□□□ 0.72
SGCA-208ENST00000512526 PUM3Q15397 648 aaKnown RBP19.56■□□□□ 0.72
SGCA-208ENST00000512526 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms