RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 KRT23Q9C075 422 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 TULP4Q9NRJ4 1543 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 DHX32Q7L7V1 743 aaKnown RBP15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 LAMC1P11047 1609 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 MED14O60244 1454 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 ZBTB43O43298 467 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 RAB3GAP1Q15042 981 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 TMTC2Q8N394 836 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 CNNM2Q9H8M5 875 aa15.26■□□□□ 0.03
PCDHA4-202ENST00000512229 WTAPQ15007 396 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 RUFY3Q7L099 469 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 ESR2Q92731 530 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 CEP89Q96ST8 783 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 NSFL1CQ9UNZ2 370 aaKnown RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 EAF2Q96CJ1 260 aaPredicted RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 DDX19AQ9NUU7 478 aaKnown RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 CPSF1Q10570 1443 aaKnown RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 CPA1P15085 419 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 PTPRMP28827 1452 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 PRC1O43663 620 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 SEC63Q9UGP8 760 aaKnown RBP15.25■□□□□ 0.03
PCDHA4-202ENST00000512229 ESPNB1AK53 854 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 CCAR1Q8IX12 1150 aaKnown RBP15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 SPATA31A3Q5VYP0 1347 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 STIM1Q13586 685 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 CHST3Q7LGC8 479 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 MAGEB6Q8N7X4 407 aa15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 IBTKQ9P2D0 1353 aaPredicted RBP15.24■□□□□ 0.03
PCDHA4-202ENST00000512229 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 KIF5BP33176 963 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 PUM3Q15397 648 aaKnown RBP15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 CTAGE5O15320 804 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 ATP5JP18859 108 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 GNAT2P19087 354 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 GSTO1P78417 241 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 ASAP1Q9ULH1 1129 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 R3HCC1Q9Y3T6 440 aaKnown RBP15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 SIRT2Q8IXJ6 389 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
PCDHA4-202ENST00000512229 NLRP5P59047 1200 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 ANO10Q9NW15 660 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 MAGEC2Q9UBF1 373 aaPredicted RBP15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 CCDC129Q6ZRS4 1044 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 ANKRD2Q9GZV1 360 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 F13A1P00488 732 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 SNX14Q9Y5W7 946 aa15.22■□□□□ 0.03
PCDHA4-202ENST00000512229 NOC3LQ8WTT2 800 aaKnown RBP15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 USP21Q9UK80 565 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 SMTNL1A8MU46 457 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 EPB41L2O43491 1005 aaKnown RBP15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 APPBP2Q92624 585 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 CLTCQ00610 1675 aaKnown RBP15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 COPRSQ9NQ92 184 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
PCDHA4-202ENST00000512229 SLC27A2O14975 620 aa15.21■□□□□ 0.02
PCDHA4-202ENST00000512229 EPS15P42566 896 aa15.21■□□□□ 0.02
PCDHA4-202ENST00000512229 LPIN2Q92539 896 aa15.21■□□□□ 0.02
PCDHA4-202ENST00000512229 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 OFD1O75665 1012 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 DHX8Q14562 1220 aaKnown RBP15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 ALG1Q9BT22 464 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 DNM1Q05193 864 aaKnown RBP15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 SYT1P21579 422 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 HSPA4P34932 840 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms