RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 UTYO14607 1347 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 FOXN1O15353 648 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 MYL6BP14649 208 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 NPR1P16066 1061 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 NUCB1Q02818 461 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
HOXA4-203ENST00000511914 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
HOXA4-203ENST00000511914 DCTPP1Q9H773 170 aa12.96□□□□□ -0.33
HOXA4-203ENST00000511914 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
HOXA4-203ENST00000511914 CNTNAP1P78357 1384 aa12.95□□□□□ -0.34
HOXA4-203ENST00000511914 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
HOXA4-203ENST00000511914 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
HOXA4-203ENST00000511914 CLEC4GQ6UXB4 293 aa12.95□□□□□ -0.34
HOXA4-203ENST00000511914 TPTE2Q6XPS3 522 aa12.95□□□□□ -0.34
HOXA4-203ENST00000511914 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
HOXA4-203ENST00000511914 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
HOXA4-203ENST00000511914 ATP8B2P98198 1209 aa12.94□□□□□ -0.34
HOXA4-203ENST00000511914 AIMP1Q12904 312 aaKnown RBP12.94□□□□□ -0.34
HOXA4-203ENST00000511914 HLFQ16534 295 aa12.94□□□□□ -0.34
HOXA4-203ENST00000511914 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
HOXA4-203ENST00000511914 TMEM88BA6NKF7 163 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 EPHX2P34913 555 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 IARSP41252 1262 aaKnown RBP12.93□□□□□ -0.34
HOXA4-203ENST00000511914 VEGFBP49765 207 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
HOXA4-203ENST00000511914 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
HOXA4-203ENST00000511914 MTX1Q13505 466 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
HOXA4-203ENST00000511914 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
HOXA4-203ENST00000511914 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 GRM8O00222 908 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
HOXA4-203ENST00000511914 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 LTBP1Q14766 1721 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
HOXA4-203ENST00000511914 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 ABCC12Q96J65 1359 aa12.92□□□□□ -0.34
HOXA4-203ENST00000511914 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
HOXA4-203ENST00000511914 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 GCKRQ14397 625 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 SSH3Q8TE77 659 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
HOXA4-203ENST00000511914 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 COL4A5P29400 1685 aa12.91□□□□□ -0.34
HOXA4-203ENST00000511914 RGL2O15211 777 aa12.9□□□□□ -0.34
HOXA4-203ENST00000511914 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
HOXA4-203ENST00000511914 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
HOXA4-203ENST00000511914 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
HOXA4-203ENST00000511914 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
HOXA4-203ENST00000511914 CCDC191Q8NCU4 936 aa12.9□□□□□ -0.34
HOXA4-203ENST00000511914 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
HOXA4-203ENST00000511914 FZD9O00144 591 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 GPTP24298 496 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 LBX1P52954 281 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 CWF19L2Q2TBE0 894 aaKnown RBP12.89□□□□□ -0.35
HOXA4-203ENST00000511914 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
HOXA4-203ENST00000511914 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 MYD88Q99836 296 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 ABT1Q9ULW3 272 aaKnown RBP12.89□□□□□ -0.35
HOXA4-203ENST00000511914 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
HOXA4-203ENST00000511914 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 CTCFP49711 727 aaPredicted RBP12.88□□□□□ -0.35
HOXA4-203ENST00000511914 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
HOXA4-203ENST00000511914 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 DEFB115Q30KQ5 88 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 GPC2Q8N158 579 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
HOXA4-203ENST00000511914 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
HOXA4-203ENST00000511914 LAMB2P55268 1798 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 H7C1W4 665 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 RGS3P49796 1198 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
HOXA4-203ENST00000511914 GRM1Q13255 1194 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
HOXA4-203ENST00000511914 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
HOXA4-203ENST00000511914 ISCA1Q9BUE6 129 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
HOXA4-203ENST00000511914 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms