RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
COPS4-211ENST00000511891 LTBP1Q14766 1721 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 YDJCA8MPS7 323 aa12.69□□□□□ -0.38
COPS4-211ENST00000511891 PDE8AO60658 829 aa12.69□□□□□ -0.38
COPS4-211ENST00000511891 RAD17O75943 681 aa12.69□□□□□ -0.38
COPS4-211ENST00000511891 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
COPS4-211ENST00000511891 FLIIQ13045 1269 aa12.69□□□□□ -0.38
COPS4-211ENST00000511891 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
COPS4-211ENST00000511891 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
COPS4-211ENST00000511891 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
COPS4-211ENST00000511891 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 CCDC152Q4G0S7 254 aa12.68□□□□□ -0.38
COPS4-211ENST00000511891 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
COPS4-211ENST00000511891 PASKQ96RG2 1323 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
COPS4-211ENST00000511891 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
COPS4-211ENST00000511891 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
COPS4-211ENST00000511891 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 CIAPIN1Q6FI81 312 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 DBNDD1Q9H9R9 158 aa12.67□□□□□ -0.38
COPS4-211ENST00000511891 CTSWP56202 376 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 DOK7Q18PE1 504 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 TBC1D16Q8TBP0 767 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
COPS4-211ENST00000511891 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 F6X3S4 739 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 H7C1W4 665 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 UFL1O94874 794 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
COPS4-211ENST00000511891 GCKRQ14397 625 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 GREM2Q9H772 168 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
COPS4-211ENST00000511891 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
COPS4-211ENST00000511891 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 PSMD14O00487 310 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 ECE2O60344 883 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 TNIP1Q15025 636 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
COPS4-211ENST00000511891 EYA3Q99504 573 aa12.64□□□□□ -0.39
COPS4-211ENST00000511891 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
COPS4-211ENST00000511891 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
COPS4-211ENST00000511891 CASP7P55210 303 aa12.63□□□□□ -0.39
COPS4-211ENST00000511891 LINS1Q8NG48 757 aa12.63□□□□□ -0.39
COPS4-211ENST00000511891 CDC5LQ99459 802 aaKnown RBP12.63□□□□□ -0.39
COPS4-211ENST00000511891 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
COPS4-211ENST00000511891 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
COPS4-211ENST00000511891 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
COPS4-211ENST00000511891 RTL9Q8NET4 1388 aa12.62□□□□□ -0.39
COPS4-211ENST00000511891 TRAF5O00463 557 aa12.62□□□□□ -0.39
COPS4-211ENST00000511891 HIRAP54198 1017 aaPredicted RBP12.62□□□□□ -0.39
COPS4-211ENST00000511891 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
COPS4-211ENST00000511891 TRPM4Q8TD43 1214 aa12.62□□□□□ -0.39
COPS4-211ENST00000511891 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
COPS4-211ENST00000511891 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
COPS4-211ENST00000511891 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
COPS4-211ENST00000511891 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
COPS4-211ENST00000511891 ZC3H12CQ9C0D7 883 aaKnown RBP12.61□□□□□ -0.39
COPS4-211ENST00000511891 XDHP47989 1333 aa12.61□□□□□ -0.39
COPS4-211ENST00000511891 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 G3V3G9 751 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 ITGA6P23229 1130 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
COPS4-211ENST00000511891 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 MYH3P11055 1940 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 CACNA1FO60840 1977 aa12.6□□□□□ -0.39
COPS4-211ENST00000511891 H7C1D1 291 aa12.59□□□□□ -0.39
COPS4-211ENST00000511891 EGFRP00533 1210 aa12.59□□□□□ -0.39
COPS4-211ENST00000511891 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
COPS4-211ENST00000511891 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
COPS4-211ENST00000511891 VEGFBP49765 207 aa12.59□□□□□ -0.39
COPS4-211ENST00000511891 RBM26Q5T8P6 1007 aaKnown RBP12.59□□□□□ -0.39
COPS4-211ENST00000511891 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
COPS4-211ENST00000511891 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
COPS4-211ENST00000511891 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
COPS4-211ENST00000511891 CSF1RP07333 972 aa12.58□□□□□ -0.4
COPS4-211ENST00000511891 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
COPS4-211ENST00000511891 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms