RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
SIM1-204ENST00000511871 C6orf229H3BNL8 230 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 MPHOSPH8Q99549 860 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 XDHP47989 1333 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 ZNF541Q9H0D2 1346 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 SCN4AP35499 1836 aa20.21■□□□□ 0.83
SIM1-204ENST00000511871 KIF3CO14782 793 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 NIM1KQ8IY84 436 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 CLUAP1Q96AJ1 413 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
SIM1-204ENST00000511871 UBTFL1P0CB47 393 aaPredicted RBP20.2■□□□□ 0.82
SIM1-204ENST00000511871 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 RRAGCQ9HB90 399 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 GGA1Q9UJY5 639 aa20.2■□□□□ 0.82
SIM1-204ENST00000511871 UFL1O94874 794 aa20.19■□□□□ 0.82
SIM1-204ENST00000511871 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
SIM1-204ENST00000511871 GPR101Q96P66 508 aaPredicted RBP20.19■□□□□ 0.82
SIM1-204ENST00000511871 EYA3Q99504 573 aa20.19■□□□□ 0.82
SIM1-204ENST00000511871 MEIS3Q99687 375 aa20.19■□□□□ 0.82
SIM1-204ENST00000511871 ATP2B4P23634 1241 aa20.18■□□□□ 0.82
SIM1-204ENST00000511871 ZNRF3Q9ULT6 936 aa20.18■□□□□ 0.82
SIM1-204ENST00000511871 PSME4Q14997 1843 aa20.18■□□□□ 0.82
SIM1-204ENST00000511871 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
SIM1-204ENST00000511871 POTECB2RU33 542 aa20.17■□□□□ 0.82
SIM1-204ENST00000511871 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
SIM1-204ENST00000511871 EIF6P56537 245 aaKnown RBP20.17■□□□□ 0.82
SIM1-204ENST00000511871 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
SIM1-204ENST00000511871 TAF7LQ5H9L4 462 aa20.16■□□□□ 0.82
SIM1-204ENST00000511871 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
SIM1-204ENST00000511871 ANKRD2Q9GZV1 360 aa20.16■□□□□ 0.82
SIM1-204ENST00000511871 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
SIM1-204ENST00000511871 WTIPA6NIX2 430 aaPredicted RBP20.16■□□□□ 0.82
SIM1-204ENST00000511871 CHRNDQ07001 517 aa20.16■□□□□ 0.82
SIM1-204ENST00000511871 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
SIM1-204ENST00000511871 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
SIM1-204ENST00000511871 HDAC5Q9UQL6 1122 aa20.16■□□□□ 0.82
SIM1-204ENST00000511871 GNAI3P08754 354 aa20.15■□□□□ 0.82
SIM1-204ENST00000511871 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
SIM1-204ENST00000511871 LDHAL6AQ6ZMR3 332 aa20.15■□□□□ 0.82
SIM1-204ENST00000511871 GPC2Q8N158 579 aa20.15■□□□□ 0.82
SIM1-204ENST00000511871 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
SIM1-204ENST00000511871 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
SIM1-204ENST00000511871 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
SIM1-204ENST00000511871 YDJCA8MPS7 323 aa20.14■□□□□ 0.81
SIM1-204ENST00000511871 RLBP1P12271 317 aa20.14■□□□□ 0.81
SIM1-204ENST00000511871 CNNM1Q9NRU3 951 aa20.14■□□□□ 0.81
SIM1-204ENST00000511871 CXCL9Q07325 125 aa20.13■□□□□ 0.81
SIM1-204ENST00000511871 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
SIM1-204ENST00000511871 PUS3Q9BZE2 481 aaKnown RBP20.13■□□□□ 0.81
SIM1-204ENST00000511871 DBNDD1Q9H9R9 158 aa20.13■□□□□ 0.81
SIM1-204ENST00000511871 MED23Q9ULK4 1368 aa20.13■□□□□ 0.81
SIM1-204ENST00000511871 RFX5P48382 616 aaPredicted RBP20.13■□□□□ 0.81
SIM1-204ENST00000511871 DOK7Q18PE1 504 aa20.13■□□□□ 0.81
SIM1-204ENST00000511871 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
SIM1-204ENST00000511871 ZNF804BA4D1E1 1349 aa20.12■□□□□ 0.81
SIM1-204ENST00000511871 ECE2O60344 883 aa20.12■□□□□ 0.81
SIM1-204ENST00000511871 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
SIM1-204ENST00000511871 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
SIM1-204ENST00000511871 TAF5LO75529 589 aa20.11■□□□□ 0.81
SIM1-204ENST00000511871 CIAPIN1Q6FI81 312 aa20.11■□□□□ 0.81
SIM1-204ENST00000511871 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
SIM1-204ENST00000511871 RIPOR2Q9Y4F9 1068 aa20.11■□□□□ 0.81
SIM1-204ENST00000511871 RAD17O75943 681 aa20.1■□□□□ 0.81
SIM1-204ENST00000511871 TOMM70O94826 608 aa20.1■□□□□ 0.81
SIM1-204ENST00000511871 IQCA1LA6NCM1 817 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 SNAP23O00161 211 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 C1QTNF8P60827 252 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 TNIP1Q15025 636 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 LRRC24Q50LG9 513 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
SIM1-204ENST00000511871 PANK1Q8TE04 598 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 G3V3G9 751 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 GNAI2P04899 355 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 MS4A1P11836 297 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 KCNJ4P48050 445 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 PTPN12Q05209 780 aaKnown RBP20.09■□□□□ 0.81
SIM1-204ENST00000511871 DCAF8Q5TAQ9 597 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
SIM1-204ENST00000511871 PLIN1O60240 522 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 KLRK1P26718 216 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 SCNN1DP51172 638 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 MTX1Q13505 466 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 HACL1Q9UJ83 578 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 MROH5Q6ZUA9 1318 aa20.08■□□□□ 0.8
SIM1-204ENST00000511871 ZBTB7BO15156 539 aaPredicted RBP20.07■□□□□ 0.8
SIM1-204ENST00000511871 C15orf52Q6ZUT6 534 aaKnown RBP20.07■□□□□ 0.8
SIM1-204ENST00000511871 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
SIM1-204ENST00000511871 TAF1DQ9H5J8 278 aaPredicted RBP20.07■□□□□ 0.8
SIM1-204ENST00000511871 ADAMTSL1Q8N6G6 1762 aa20.06■□□□□ 0.8
SIM1-204ENST00000511871 EYA2O00167 538 aa20.06■□□□□ 0.8
SIM1-204ENST00000511871 PSMD14O00487 310 aa20.06■□□□□ 0.8
SIM1-204ENST00000511871 PODNQ7Z5L7 613 aa20.06■□□□□ 0.8
SIM1-204ENST00000511871 GMPSP49915 693 aaPredicted RBP20.05■□□□□ 0.8
SIM1-204ENST00000511871 COA1Q9GZY4 146 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 LMOD1P29536 600 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms