RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PIBF1Q8WXW3 757 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 CRNKL1Q9BZJ0 848 aaKnown RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SCN11AQ9UI33 1791 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SEMA3EO15041 775 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 VPS53Q5VIR6 699 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 TOMM22Q9NS69 142 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 TCP11L1Q9NUJ3 509 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 TRIM37O94972 964 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SAFB2Q14151 953 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 COG6Q9Y2V7 657 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 NASPP49321 788 aaPredicted RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 BRDTQ58F21 947 aaPredicted RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 ZNF804AQ7Z570 1209 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SOS2Q07890 1332 aaPredicted RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 BICDL2A1A5D9 508 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 NBR1Q14596 966 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CDK5RAP2Q96SN8 1893 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 hCG_1984214I3L0E3 225 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 SURF6O75683 361 aaKnown RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MYL1P05976 194 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 KCNA6P17658 529 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 B4GALNT3Q6L9W6 998 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 LUZP1Q86V48 1076 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 SNX21Q969T3 373 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 TMEM2Q9UHN6 1383 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MBD5Q9P267 1494 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 TRIP11Q15643 1979 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 PLCB2Q00722 1185 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 E2F5Q15329 346 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CCDC14Q49A88 953 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 FAM43BQ6ZT52 329 aaPredicted RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 TSPY26PQ9H489 355 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CEP170BQ9Y4F5 1589 aaPredicted RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 GCOM1H8Y6P7 765 aaPredicted RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MYZAPP0CAP1 466 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 NBPF8Q3BBV2 869 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 NBPF14Q5TI25 921 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 AIDAQ96BJ3 306 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CALML4Q96GE6 196 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 PHF23Q9BUL5 403 aaPredicted RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CCDC183Q5T5S1 534 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MICALCLQ6ZW33 695 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 IPO4Q8TEX9 1081 aaKnown RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 PIK3C2BO00750 1634 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 RPLP2P05387 115 aaKnown RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 TNFAIP1Q13829 316 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 STK38Q15208 465 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
PTPN13-209ENST00000511467 NUP133Q8WUM0 1156 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 LMBR1Q8WVP7 490 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 MTA3Q9BTC8 594 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 DONSONQ9NYP3 566 aa5.68□□□□□ -1.5
PTPN13-209ENST00000511467 CKAP4Q07065 602 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 BMS1Q14692 1282 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 TEKT1Q969V4 418 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 PAXBP1Q9Y5B6 917 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 SLX4Q8IY92 1834 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 ERBB3P21860 1342 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 HOMER1Q86YM7 354 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 NAPBQ9H115 298 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 ATG3Q9NT62 314 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 SPATA31D1Q6ZQQ2 1576 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 XRN1Q8IZH2 1706 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 STAMBPO95630 424 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 COPB2P35606 906 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 HACE1Q8IYU2 909 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 PPM1EQ8WY54 764 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 FEZ2Q9UHY8 353 aaPredicted RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 TMEM131LA2VDJ0 1609 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 MYH14Q7Z406 1995 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 OGFOD1Q8N543 542 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 ESR2Q92731 530 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 CPSF1Q10570 1443 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 CCDC175P0C221 793 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 SULT6B1Q6IMI4 303 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 FCHSD1Q86WN1 690 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 NCAPGQ9BPX3 1015 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 NFATC2IPQ8NCF5 419 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 RNF214Q8ND24 703 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 GOLGA5Q8TBA6 731 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 PCMTD1Q96MG8 357 aaPredicted RBP5.67□□□□□ -1.5
PTPN13-209ENST00000511467 ALS2CR12Q96Q35 445 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 CSRNP2Q9H175 543 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 HMOX1P09601 288 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 TDO2P48775 406 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 WDR66Q8TBY9 1149 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 CCDC102AQ96A19 550 aa5.67□□□□□ -1.5
PTPN13-209ENST00000511467 MPHOSPH10O00566 681 aaKnown RBP5.66□□□□□ -1.5
PTPN13-209ENST00000511467 ADGRB2O60241 1585 aa5.66□□□□□ -1.5
PTPN13-209ENST00000511467 CABP1Q9NZU7 370 aa5.66□□□□□ -1.5
PTPN13-209ENST00000511467 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
PTPN13-209ENST00000511467 LAMB4A4D0S4 1761 aa5.66□□□□□ -1.5
PTPN13-209ENST00000511467 STX10O60499 249 aa5.66□□□□□ -1.5
PTPN13-209ENST00000511467 PABPC4Q13310 644 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPN13-209ENST00000511467 CABP2Q9NPB3 220 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms