RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 MTERF4Q7Z6M4 381 aaKnown RBP15.52■□□□□ 0.08
HMGB2-205ENST00000511316 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
HMGB2-205ENST00000511316 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.08
HMGB2-205ENST00000511316 COL11A2P13942 1736 aaPredicted RBP15.52■□□□□ 0.07
HMGB2-205ENST00000511316 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.07
HMGB2-205ENST00000511316 TTLL6Q8N841 843 aa15.52■□□□□ 0.07
HMGB2-205ENST00000511316 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 PRELPP51888 382 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 FAM89AQ96GI7 184 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 INTS4Q96HW7 963 aaKnown RBP15.51■□□□□ 0.07
HMGB2-205ENST00000511316 C1orf115Q9H7X2 142 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
HMGB2-205ENST00000511316 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
HMGB2-205ENST00000511316 CD2BP2O95400 341 aaKnown RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 HOXA10P31260 410 aaPredicted RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 STYK1Q6J9G0 422 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 IL17RAQ96F46 866 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 PDLIM2Q96JY6 352 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 MYD88Q99836 296 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 SRCIN1Q9C0H9 1055 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 LMBRD1Q9NUN5 540 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 ANKRD36CQ5JPF3 1778 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 ZNF500O60304 480 aaPredicted RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 HCLS1P14317 486 aaPredicted RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 SLC51AQ86UW1 340 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 PDCL3Q9H2J4 239 aa15.5■□□□□ 0.07
HMGB2-205ENST00000511316 NOL7Q9UMY1 257 aaKnown RBP15.5■□□□□ 0.07
HMGB2-205ENST00000511316 AOX1Q06278 1338 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 NPR1P16066 1061 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
HMGB2-205ENST00000511316 ZSCAN23Q3MJ62 389 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 MCTP1Q6DN14 999 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 CCDC191Q8NCU4 936 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.073e-29■■■■□ 24.7
HMGB2-205ENST00000511316 SLX4Q8IY92 1834 aa15.49■□□□□ 0.07
HMGB2-205ENST00000511316 CACNA1FO60840 1977 aa15.48■□□□□ 0.07
HMGB2-205ENST00000511316 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
HMGB2-205ENST00000511316 ARFGEF1Q9Y6D6 1849 aa15.48■□□□□ 0.07
HMGB2-205ENST00000511316 SDSP20132 328 aa15.48■□□□□ 0.07
HMGB2-205ENST00000511316 CWF19L2Q2TBE0 894 aaKnown RBP15.48■□□□□ 0.07
HMGB2-205ENST00000511316 F6X3S4 739 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 NPHP1O15259 732 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
HMGB2-205ENST00000511316 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
HMGB2-205ENST00000511316 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 ZBTB38Q8NAP3 1195 aaPredicted RBP15.47■□□□□ 0.07
HMGB2-205ENST00000511316 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
HMGB2-205ENST00000511316 CCDC39Q9UFE4 941 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 CASP7P55210 303 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 FKBP5Q13451 457 aaPredicted RBP15.47■□□□□ 0.07
HMGB2-205ENST00000511316 BEND3Q5T5X7 828 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 LRSAM1Q6UWE0 723 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 DNAAF4Q8WXU2 420 aa15.47■□□□□ 0.07
HMGB2-205ENST00000511316 NFKBIEO00221 500 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 C21orf2O43822 256 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 PCCAP05165 728 aaPredicted RBP15.46■□□□□ 0.07
HMGB2-205ENST00000511316 GNAI3P08754 354 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 FAM184AQ8NB25 1140 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 CNKSR1Q969H4 720 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 SNED1Q8TER0 1413 aa15.46■□□□□ 0.07
HMGB2-205ENST00000511316 H7C1W4 665 aa15.45■□□□□ 0.06
HMGB2-205ENST00000511316 NCLP19338 710 aaKnown RBP15.45■□□□□ 0.06
HMGB2-205ENST00000511316 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
HMGB2-205ENST00000511316 CHD4Q14839 1912 aa15.45■□□□□ 0.06
HMGB2-205ENST00000511316 YY1P25490 414 aa15.45■□□□□ 0.06
HMGB2-205ENST00000511316 SF3B3Q15393 1217 aaKnown RBP15.45■□□□□ 0.06
HMGB2-205ENST00000511316 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
HMGB2-205ENST00000511316 CWC25Q9NXE8 425 aaPredicted RBP15.45■□□□□ 0.06
HMGB2-205ENST00000511316 PDIA4P13667 645 aaKnown RBP15.44■□□□□ 0.06
HMGB2-205ENST00000511316 CUL4AQ13619 759 aa15.44■□□□□ 0.06
HMGB2-205ENST00000511316 GCKRQ14397 625 aa15.44■□□□□ 0.06
HMGB2-205ENST00000511316 LINS1Q8NG48 757 aa15.44■□□□□ 0.06
HMGB2-205ENST00000511316 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
HMGB2-205ENST00000511316 COL4A1P02462 1669 aa15.44■□□□□ 0.06
HMGB2-205ENST00000511316 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
HMGB2-205ENST00000511316 IRS4O14654 1257 aaPredicted RBP15.43■□□□□ 0.06
HMGB2-205ENST00000511316 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
HMGB2-205ENST00000511316 GNAI2P04899 355 aa15.43■□□□□ 0.06
HMGB2-205ENST00000511316 ALDH1B1P30837 517 aa15.43■□□□□ 0.06
HMGB2-205ENST00000511316 KIAA1211Q6ZU35 1233 aa15.43■□□□□ 0.06
HMGB2-205ENST00000511316 PDE1AP54750 535 aa15.43■□□□□ 0.06
HMGB2-205ENST00000511316 UVSSAQ2YD98 709 aa15.43■□□□□ 0.06
HMGB2-205ENST00000511316 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
HMGB2-205ENST00000511316 ZKSCAN5Q9Y2L8 839 aa15.42■□□□□ 0.06
HMGB2-205ENST00000511316 LAMB2P55268 1798 aa15.42■□□□□ 0.06
HMGB2-205ENST00000511316 RASSF7Q02833 373 aa15.41■□□□□ 0.06
HMGB2-205ENST00000511316 CDHR2Q9BYE9 1310 aa15.41■□□□□ 0.06
HMGB2-205ENST00000511316 SBF1O95248 1867 aa15.41■□□□□ 0.06
HMGB2-205ENST00000511316 PRPF40AO75400 957 aaKnown RBP15.4■□□□□ 0.06
HMGB2-205ENST00000511316 BRD1O95696 1058 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 ZNF784Q8NCA9 323 aaPredicted RBP15.4■□□□□ 0.06
HMGB2-205ENST00000511316 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms