RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 CKAP2LQ8IYA6 745 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 AGXT2Q9BYV1 514 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 NAT10Q9H0A0 1025 aaKnown RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 IMPACTQ9P2X3 320 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 TFIP11Q9UBB9 837 aaKnown RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 MST1RQ04912 1400 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 PALLDQ8WX93 1383 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 ANXA1P04083 346 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 KCNA6P17658 529 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 ADD1P35611 737 aaKnown RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 CBX1P83916 185 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 GCKRQ14397 625 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 PDIA6Q15084 440 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 TPD52L1Q16890 204 aaPredicted RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 MPRIPQ6WCQ1 1025 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 CCDC73Q6ZRK6 1079 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 DHX32Q7L7V1 743 aaKnown RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 ZNF589Q86UQ0 364 aaPredicted RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 ARHGEF25Q86VW2 580 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 CACTINQ8WUQ7 758 aaKnown RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 TSC1Q92574 1164 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 HAUS7Q99871 368 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 BPIFA3Q9BQP9 254 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 DSCC1Q9BVC3 393 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 HELLSQ9NRZ9 838 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
SNF8-210ENST00000511214 FPGT-TNNI3KV9GXZ4 949 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 PXDNQ92626 1479 aa10.67□□□□□ -0.7
SNF8-210ENST00000511214 MYH15Q9Y2K3 1946 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 A0A1W2PQ27 194 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 A0A1W2PQ64 194 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 A0A1W2PQD8 194 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 FAM160A1Q05DH4 1040 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 FAM173BQ6P4H8 233 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 Q6ZUG5 572 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 NSUN7Q8NE18 718 aaKnown RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 ENGASEQ8NFI3 743 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 ZNF274Q96GC6 653 aaPredicted RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 ERO1AQ96HE7 468 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 TLR7Q9NYK1 1049 aaKnown RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
SNF8-210ENST00000511214 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 MORC2Q9Y6X9 1032 aaPredicted RBP10.66□□□□□ -0.7
SNF8-210ENST00000511214 SALL1Q9NSC2 1324 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 BECN2A8MW95 431 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 JAK2O60674 1132 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 HSP90B1P14625 803 aaKnown RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 SCRN1Q12765 414 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 LRMPQ12912 555 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 CCAR1Q8IX12 1150 aaKnown RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 ZNF397Q8NF99 534 aaPredicted RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 JARID2Q92833 1246 aaPredicted RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 C16orf45Q96MC5 204 aaPredicted RBP10.65□□□□□ -0.7
SNF8-210ENST00000511214 NRBP1Q9UHY1 535 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 ZNF609O15014 1411 aa10.65□□□□□ -0.7
SNF8-210ENST00000511214 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
SNF8-210ENST00000511214 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
SNF8-210ENST00000511214 NRDCO43847 1150 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 CYP21A2P08686 494 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.718e-7■□□□□ 10.3
SNF8-210ENST00000511214 EVCP57679 992 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 EXOSC10Q01780 885 aaKnown RBP10.64□□□□□ -0.71
SNF8-210ENST00000511214 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 CCDC144CPQ8IYA2 1237 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
SNF8-210ENST00000511214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNF8-210ENST00000511214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNF8-210ENST00000511214 RTEL1Q9NZ71 1219 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 DBNLQ9UJU6 430 aaKnown RBP10.64□□□□□ -0.71
SNF8-210ENST00000511214 CHMP3Q9Y3E7 222 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 RGPD2P0DJD1 1756 aa10.64□□□□□ -0.71
SNF8-210ENST00000511214 FER1L4A9Z1Z3 1794 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 CCP110O43303 1012 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 MYO1BO43795 1136 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 SKILP12757 684 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 TPM4P67936 248 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 CCZ1BP86790 482 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 CCZ1P86791 482 aaPredicted RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 PTPN12Q05209 780 aaKnown RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 PSME1Q06323 249 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms