RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 NPHS2Q9NP85 383 aa9.13□□□□□ -0.95
CHD1-206ENST00000511067 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
CHD1-206ENST00000511067 PSAPP07602 524 aa9.12□□□□□ -0.95
CHD1-206ENST00000511067 LDLRAD1Q5T700 205 aa9.12□□□□□ -0.95
CHD1-206ENST00000511067 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
CHD1-206ENST00000511067 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
CHD1-206ENST00000511067 SLC30A3Q99726 388 aa9.12□□□□□ -0.95
CHD1-206ENST00000511067 COL25A1Q9BXS0 654 aaPredicted RBP9.12□□□□□ -0.95
CHD1-206ENST00000511067 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
CHD1-206ENST00000511067 METTL5Q9NRN9 209 aaKnown RBP9.12□□□□□ -0.95
CHD1-206ENST00000511067 KIF4AO95239 1232 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 IRS1P35568 1242 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 PLAURQ03405 335 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 GRIN2CQ14957 1233 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 BHMTQ93088 406 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 SUV39H2Q9H5I1 410 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 SALL4Q9UJQ4 1053 aa9.11□□□□□ -0.95
CHD1-206ENST00000511067 CYP2E1P05181 493 aaPredicted RBP9.1□□□□□ -0.95
CHD1-206ENST00000511067 POLR3DP05423 398 aaPredicted RBP9.1□□□□□ -0.95
CHD1-206ENST00000511067 NRLP54845 237 aa9.1□□□□□ -0.95
CHD1-206ENST00000511067 KIAA0319Q5VV43 1072 aa9.1□□□□□ -0.95
CHD1-206ENST00000511067 PI16Q6UXB8 463 aa9.1□□□□□ -0.95
CHD1-206ENST00000511067 AVENQ9NQS1 362 aaPredicted RBP9.1□□□□□ -0.95
CHD1-206ENST00000511067 FAM8A1Q9UBU6 413 aa9.1□□□□□ -0.95
CHD1-206ENST00000511067 GADD45BO75293 160 aaPredicted RBP9.09□□□□□ -0.95
CHD1-206ENST00000511067 KRT76Q01546 638 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 HYAL2Q12891 473 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 DHX32Q7L7V1 743 aaKnown RBP9.09□□□□□ -0.95
CHD1-206ENST00000511067 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 OSBPL7Q9BZF2 842 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 KANSL3Q9P2N6 904 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
CHD1-206ENST00000511067 PCSK7Q16549 785 aa9.08□□□□□ -0.96
CHD1-206ENST00000511067 ZNF468Q5VIY5 522 aaPredicted RBP9.08□□□□□ -0.96
CHD1-206ENST00000511067 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
CHD1-206ENST00000511067 A0A1W2PP55 124 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 GPR25O00155 361 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 CTSHP09668 335 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 GPLD1P80108 840 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 CTBSQ01459 385 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 GRM2Q14416 872 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 PEAR1Q5VY43 1037 aaPredicted RBP9.07□□□□□ -0.96
CHD1-206ENST00000511067 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
CHD1-206ENST00000511067 TRPM4Q8TD43 1214 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 PRR12Q9ULL5 1215 aa9.07□□□□□ -0.96
CHD1-206ENST00000511067 SIN3BO75182 1162 aa9.06□□□□□ -0.96
CHD1-206ENST00000511067 RNFT1Q5M7Z0 435 aa9.06□□□□□ -0.96
CHD1-206ENST00000511067 RAB44Q7Z6P3 723 aaPredicted RBP9.06□□□□□ -0.96
CHD1-206ENST00000511067 NCAPG2Q86XI2 1143 aa9.06□□□□□ -0.96
CHD1-206ENST00000511067 PPP4R2Q9NY27 417 aa9.06□□□□□ -0.96
CHD1-206ENST00000511067 BMP4P12644 408 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 GSTT1P30711 240 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 HDLBPQ00341 1268 aaKnown RBP9.05□□□□□ -0.96
CHD1-206ENST00000511067 FANCCQ00597 558 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 NXPE4Q6UWF7 544 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 EHD4Q9H223 541 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
CHD1-206ENST00000511067 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 USP17L7P0C7H9 530 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
CHD1-206ENST00000511067 MX2P20592 715 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 ZNF76P36508 570 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
CHD1-206ENST00000511067 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
CHD1-206ENST00000511067 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 CEP120Q8N960 986 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 TNFRSF25Q93038 417 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 RNF34Q969K3 372 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 SPACA7Q96KW9 195 aa9.04□□□□□ -0.96
CHD1-206ENST00000511067 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
CHD1-206ENST00000511067 ANKRD24Q8TF21 1146 aa9.03□□□□□ -0.96
CHD1-206ENST00000511067 C8orf37Q96NL8 207 aa9.03□□□□□ -0.96
CHD1-206ENST00000511067 LIN7BQ9HAP6 207 aa9.03□□□□□ -0.96
CHD1-206ENST00000511067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
CHD1-206ENST00000511067 C2CD2LO14523 706 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 ARAFP10398 606 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 MAP2K3P46734 347 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 GAS6Q14393 721 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 TAF1CQ15572 869 aaPredicted RBP9.02□□□□□ -0.97
CHD1-206ENST00000511067 METTL16Q86W50 562 aaKnown RBP9.02□□□□□ -0.97
CHD1-206ENST00000511067 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.97
CHD1-206ENST00000511067 OSMRQ99650 979 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 ZKSCAN3Q9BRR0 538 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 MBIPQ9NS73 344 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 DZANK1Q9NVP4 752 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 DNAJB12Q9NXW2 375 aaKnown RBP9.02□□□□□ -0.97
CHD1-206ENST00000511067 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
CHD1-206ENST00000511067 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 ADH6P28332 368 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 ERCC5P28715 1186 aaPredicted RBP9.01□□□□□ -0.97
CHD1-206ENST00000511067 SIK1P57059 783 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 CCNJLQ8IV13 435 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 TMEM102Q8N9M5 508 aaPredicted RBP9.01□□□□□ -0.97
CHD1-206ENST00000511067 C3orf58Q8NDZ4 430 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 TCF12Q99081 682 aa9.01□□□□□ -0.97
CHD1-206ENST00000511067 UBE2OQ9C0C9 1292 aaKnown RBP9.01□□□□□ -0.97
CHD1-206ENST00000511067 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms