RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 ITGA6P23229 1130 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 APLP1P51693 650 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 CHADLQ6NUI6 762 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 BSDC1Q9NW68 430 aaPredicted RBP18.45■□□□□ 0.54
COL12A1-210ENST00000511023 ANKIB1Q9P2G1 1089 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 PTPRCP08575 1304 aa18.45■□□□□ 0.54
COL12A1-210ENST00000511023 EPS15P42566 896 aa18.44■□□□□ 0.54
COL12A1-210ENST00000511023 HTRA3P83110 453 aa18.44■□□□□ 0.54
COL12A1-210ENST00000511023 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
COL12A1-210ENST00000511023 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
COL12A1-210ENST00000511023 DOK7Q18PE1 504 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 EAPPQ56P03 285 aaPredicted RBP18.43■□□□□ 0.54
COL12A1-210ENST00000511023 CIAPIN1Q6FI81 312 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 LDHDQ86WU2 507 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 EYA3Q99504 573 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 XDHP47989 1333 aa18.43■□□□□ 0.54
COL12A1-210ENST00000511023 ECE2O60344 883 aa18.42■□□□□ 0.54
COL12A1-210ENST00000511023 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
COL12A1-210ENST00000511023 GMPSP49915 693 aaPredicted RBP18.42■□□□□ 0.54
COL12A1-210ENST00000511023 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
COL12A1-210ENST00000511023 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
COL12A1-210ENST00000511023 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
COL12A1-210ENST00000511023 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
COL12A1-210ENST00000511023 DNAJC5GQ8N7S2 189 aa18.41■□□□□ 0.54
COL12A1-210ENST00000511023 SUCLG2Q96I99 432 aa18.41■□□□□ 0.54
COL12A1-210ENST00000511023 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
COL12A1-210ENST00000511023 GPRC5DQ9NZD1 345 aa18.41■□□□□ 0.54
COL12A1-210ENST00000511023 UTYO14607 1347 aa18.41■□□□□ 0.54
COL12A1-210ENST00000511023 ATP2B4P23634 1241 aa18.4■□□□□ 0.54
COL12A1-210ENST00000511023 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
COL12A1-210ENST00000511023 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
COL12A1-210ENST00000511023 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
COL12A1-210ENST00000511023 TNIP1Q15025 636 aa18.4■□□□□ 0.54
COL12A1-210ENST00000511023 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
COL12A1-210ENST00000511023 SCN9AQ15858 1988 aa18.4■□□□□ 0.54
COL12A1-210ENST00000511023 SHTN1A0MZ66 631 aa18.39■□□□□ 0.53
COL12A1-210ENST00000511023 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
COL12A1-210ENST00000511023 PSMD14O00487 310 aa18.39■□□□□ 0.53
COL12A1-210ENST00000511023 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
COL12A1-210ENST00000511023 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
COL12A1-210ENST00000511023 ITGBL1O95965 494 aaPredicted RBP18.38■□□□□ 0.53
COL12A1-210ENST00000511023 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
COL12A1-210ENST00000511023 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
COL12A1-210ENST00000511023 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
COL12A1-210ENST00000511023 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
COL12A1-210ENST00000511023 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
COL12A1-210ENST00000511023 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
COL12A1-210ENST00000511023 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
COL12A1-210ENST00000511023 MAP1SQ66K74 1059 aaPredicted RBP18.37■□□□□ 0.53
COL12A1-210ENST00000511023 ZNF594Q96JF6 807 aaPredicted RBP18.37■□□□□ 0.53
COL12A1-210ENST00000511023 USP44Q9H0E7 712 aa18.37■□□□□ 0.53
COL12A1-210ENST00000511023 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
COL12A1-210ENST00000511023 PASKQ96RG2 1323 aa18.37■□□□□ 0.53
COL12A1-210ENST00000511023 KLRK1P26718 216 aa18.36■□□□□ 0.53
COL12A1-210ENST00000511023 CHRNDQ07001 517 aa18.36■□□□□ 0.53
COL12A1-210ENST00000511023 USP50Q70EL3 339 aaPredicted RBP18.36■□□□□ 0.53
COL12A1-210ENST00000511023 TXNRD3Q86VQ6 643 aa18.36■□□□□ 0.53
COL12A1-210ENST00000511023 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
COL12A1-210ENST00000511023 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
COL12A1-210ENST00000511023 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 SNAP23O00161 211 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 HIRAP54198 1017 aaPredicted RBP18.35■□□□□ 0.53
COL12A1-210ENST00000511023 CNTROBQ8N137 903 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 TRPM4Q8TD43 1214 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 ANKRD2Q9GZV1 360 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 BICC1Q9H694 974 aaKnown RBP18.35■□□□□ 0.53
COL12A1-210ENST00000511023 CNOT7Q9UIV1 285 aaKnown RBP18.35■□□□□ 0.53
COL12A1-210ENST00000511023 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
COL12A1-210ENST00000511023 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
COL12A1-210ENST00000511023 TAF5LO75529 589 aa18.34■□□□□ 0.53
COL12A1-210ENST00000511023 VIL1P09327 827 aaKnown RBP18.34■□□□□ 0.53
COL12A1-210ENST00000511023 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
COL12A1-210ENST00000511023 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
COL12A1-210ENST00000511023 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
COL12A1-210ENST00000511023 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
COL12A1-210ENST00000511023 DPF2Q92785 391 aa18.34■□□□□ 0.53
COL12A1-210ENST00000511023 PSME4Q14997 1843 aa18.33■□□□□ 0.53
COL12A1-210ENST00000511023 IRS2Q9Y4H2 1338 aa18.33■□□□□ 0.53
COL12A1-210ENST00000511023 G3V3G9 751 aa18.33■□□□□ 0.52
COL12A1-210ENST00000511023 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
COL12A1-210ENST00000511023 PCNTO95613 3336 aa18.33■□□□□ 0.52
COL12A1-210ENST00000511023 EGFRP00533 1210 aa18.32■□□□□ 0.52
COL12A1-210ENST00000511023 RPS12P25398 132 aaKnown RBP18.32■□□□□ 0.52
COL12A1-210ENST00000511023 PODNQ7Z5L7 613 aa18.32■□□□□ 0.52
COL12A1-210ENST00000511023 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
COL12A1-210ENST00000511023 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
COL12A1-210ENST00000511023 ZNF646O15015 1829 aaPredicted RBP18.32■□□□□ 0.52
COL12A1-210ENST00000511023 BCAR3O75815 825 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 FMR1Q06787 632 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL12A1-210ENST00000511023 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
COL12A1-210ENST00000511023 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 ZNF609O15014 1411 aa18.31■□□□□ 0.52
COL12A1-210ENST00000511023 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms