RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 RIMBP2O15034 1052 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 GMPSP49915 693 aaPredicted RBP15.39■□□□□ 0.05
CHFR-208ENST00000511001 LINS1Q8NG48 757 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 PLA2G12BQ9BX93 195 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 GREM2Q9H772 168 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 GPRC5DQ9NZD1 345 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 ANKRD18AQ8IVF6 992 aa15.38■□□□□ 0.05
CHFR-208ENST00000511001 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
CHFR-208ENST00000511001 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
CHFR-208ENST00000511001 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
CHFR-208ENST00000511001 UFL1O94874 794 aa15.37■□□□□ 0.05
CHFR-208ENST00000511001 TNIP1Q15025 636 aa15.37■□□□□ 0.05
CHFR-208ENST00000511001 BEND3Q5T5X7 828 aa15.37■□□□□ 0.05
CHFR-208ENST00000511001 USP50Q70EL3 339 aaPredicted RBP15.37■□□□□ 0.05
CHFR-208ENST00000511001 EYA3Q99504 573 aa15.37■□□□□ 0.05
CHFR-208ENST00000511001 ADARB2Q9NS39 739 aaKnown RBP15.37■□□□□ 0.05
CHFR-208ENST00000511001 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 PSMD14O00487 310 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 ECE2O60344 883 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 CDC5LQ99459 802 aaKnown RBP15.36■□□□□ 0.05
CHFR-208ENST00000511001 KCNQ5Q9NR82 932 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
CHFR-208ENST00000511001 GGA1Q9UJY5 639 aa15.36■□□□□ 0.05
CHFR-208ENST00000511001 CSF1RP07333 972 aa15.35■□□□□ 0.05
CHFR-208ENST00000511001 BCL2L13Q9BXK5 485 aa15.35■□□□□ 0.05
CHFR-208ENST00000511001 BSDC1Q9NW68 430 aaPredicted RBP15.35■□□□□ 0.05
CHFR-208ENST00000511001 ANKIB1Q9P2G1 1089 aa15.35■□□□□ 0.05
CHFR-208ENST00000511001 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
CHFR-208ENST00000511001 XDHP47989 1333 aa15.35■□□□□ 0.05
CHFR-208ENST00000511001 WTIPA6NIX2 430 aaPredicted RBP15.34■□□□□ 0.05
CHFR-208ENST00000511001 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
CHFR-208ENST00000511001 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
CHFR-208ENST00000511001 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHFR-208ENST00000511001 SLFN5Q08AF3 891 aa15.34■□□□□ 0.05
CHFR-208ENST00000511001 FAM161AQ3B820 660 aa15.34■□□□□ 0.05
CHFR-208ENST00000511001 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
CHFR-208ENST00000511001 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
CHFR-208ENST00000511001 CNOT7Q9UIV1 285 aaKnown RBP15.34■□□□□ 0.05
CHFR-208ENST00000511001 MINPP1Q9UNW1 487 aa15.34■□□□□ 0.05
CHFR-208ENST00000511001 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 E9PSI1 815 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 ITGA6P23229 1130 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 ATP2B4P23634 1241 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
CHFR-208ENST00000511001 DPF2Q92785 391 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 PGAP2Q9UHJ9 254 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
CHFR-208ENST00000511001 FOXO4P98177 505 aa15.32■□□□□ 0.04
CHFR-208ENST00000511001 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
CHFR-208ENST00000511001 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
CHFR-208ENST00000511001 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
CHFR-208ENST00000511001 TRAF5O00463 557 aa15.31■□□□□ 0.04
CHFR-208ENST00000511001 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
CHFR-208ENST00000511001 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
CHFR-208ENST00000511001 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
CHFR-208ENST00000511001 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
CHFR-208ENST00000511001 ZNF609O15014 1411 aa15.31■□□□□ 0.04
CHFR-208ENST00000511001 GRM8O00222 908 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 FOXN1O15353 648 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 EGFRP00533 1210 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
CHFR-208ENST00000511001 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
CHFR-208ENST00000511001 SAMD7Q7Z3H4 446 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 MED23Q9ULK4 1368 aa15.3■□□□□ 0.04
CHFR-208ENST00000511001 H7C1D1 291 aa15.29■□□□□ 0.04
CHFR-208ENST00000511001 CST9Q5W186 159 aa15.29■□□□□ 0.04
CHFR-208ENST00000511001 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
CHFR-208ENST00000511001 ZC3H15Q8WU90 426 aaKnown RBP15.29■□□□□ 0.04
CHFR-208ENST00000511001 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 RASSF10A6NK89 507 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 G3V3G9 751 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 TXNRD3Q86VQ6 643 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 GMLQ99445 158 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
CHFR-208ENST00000511001 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 LEMD3Q9Y2U8 911 aa15.28■□□□□ 0.04
CHFR-208ENST00000511001 KLRK1P26718 216 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 VEGFBP49765 207 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 CHRNDQ07001 517 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 TBC1D10BQ4KMP7 808 aaPredicted RBP15.27■□□□□ 0.04
CHFR-208ENST00000511001 RSBN1LQ6PCB5 846 aaPredicted RBP15.27■□□□□ 0.04
CHFR-208ENST00000511001 LMBR1LQ6UX01 489 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
CHFR-208ENST00000511001 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 UTYO14607 1347 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 PTPRCP08575 1304 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 IRS2Q9Y4H2 1338 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 SNAP23O00161 211 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
CHFR-208ENST00000511001 AGBL3Q8NEM8 1001 aa15.26■□□□□ 0.03
CHFR-208ENST00000511001 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms