RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
DDX41-211ENST00000510171 VIL1P09327 827 aaKnown RBP13.52□□□□□ -0.25
DDX41-211ENST00000510171 HSP90B1P14625 803 aaKnown RBP13.52□□□□□ -0.25
DDX41-211ENST00000510171 ZNF157P51786 506 aaPredicted RBP13.52□□□□□ -0.25
DDX41-211ENST00000510171 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.25
DDX41-211ENST00000510171 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
DDX41-211ENST00000510171 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
DDX41-211ENST00000510171 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.25
DDX41-211ENST00000510171 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.25
DDX41-211ENST00000510171 RTL9Q8NET4 1388 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
DDX41-211ENST00000510171 FAM155AB1AL88 458 aaPredicted RBP13.51□□□□□ -0.25
DDX41-211ENST00000510171 SLC34A2O95436 690 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
DDX41-211ENST00000510171 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
DDX41-211ENST00000510171 UFL1O94874 794 aa13.5□□□□□ -0.25
DDX41-211ENST00000510171 SEC31BQ9NQW1 1179 aa13.5□□□□□ -0.25
DDX41-211ENST00000510171 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
DDX41-211ENST00000510171 GGA1Q9UJY5 639 aa13.5□□□□□ -0.25
DDX41-211ENST00000510171 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
DDX41-211ENST00000510171 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
DDX41-211ENST00000510171 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
DDX41-211ENST00000510171 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
DDX41-211ENST00000510171 DUOX1Q9NRD9 1551 aa13.49□□□□□ -0.25
DDX41-211ENST00000510171 TRPA1O75762 1119 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
DDX41-211ENST00000510171 SCARF1Q14162 830 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
DDX41-211ENST00000510171 CCDC191Q8NCU4 936 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 AGBL3Q8NEM8 1001 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 MYD88Q99836 296 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 PHAXQ9H814 394 aaKnown RBP13.48□□□□□ -0.25
DDX41-211ENST00000510171 RNF186Q9NXI6 227 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 TRPM7Q96QT4 1865 aa13.48□□□□□ -0.25
DDX41-211ENST00000510171 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 PDE8AO60658 829 aa13.47□□□□□ -0.25
DDX41-211ENST00000510171 PCCAP05165 728 aaPredicted RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 SLC10A3P09131 477 aa13.47□□□□□ -0.25
DDX41-211ENST00000510171 ZNF853P0CG23 659 aa13.47□□□□□ -0.25
DDX41-211ENST00000510171 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
DDX41-211ENST00000510171 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
DDX41-211ENST00000510171 CSRNP1Q96S65 589 aa13.47□□□□□ -0.25
DDX41-211ENST00000510171 ANKRD36CQ5JPF3 1778 aa13.46□□□□□ -0.25
DDX41-211ENST00000510171 USP17L8P0C7I0 530 aa13.46□□□□□ -0.25
DDX41-211ENST00000510171 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
DDX41-211ENST00000510171 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
DDX41-211ENST00000510171 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
DDX41-211ENST00000510171 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
DDX41-211ENST00000510171 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
DDX41-211ENST00000510171 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
DDX41-211ENST00000510171 GNAI1P63096 354 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 FKBP1BP68106 108 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 GMLQ99445 158 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
DDX41-211ENST00000510171 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
DDX41-211ENST00000510171 XDHP47989 1333 aa13.44□□□□□ -0.26
DDX41-211ENST00000510171 APAF1O14727 1248 aa13.43□□□□□ -0.26
DDX41-211ENST00000510171 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
DDX41-211ENST00000510171 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
DDX41-211ENST00000510171 C8orf58Q8NAV2 365 aa13.43□□□□□ -0.26
DDX41-211ENST00000510171 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
DDX41-211ENST00000510171 LAMB2P55268 1798 aa13.43□□□□□ -0.26
DDX41-211ENST00000510171 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
DDX41-211ENST00000510171 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
DDX41-211ENST00000510171 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
DDX41-211ENST00000510171 COL4A1P02462 1669 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 ZNF609O15014 1411 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 UBE2Q2LH0YL09 131 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 CTSWP56202 376 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 SOX10P56693 466 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 MOB2Q70IA6 237 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
DDX41-211ENST00000510171 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
DDX41-211ENST00000510171 MAP3K2Q9Y2U5 619 aa13.41□□□□□ -0.26
DDX41-211ENST00000510171 TAF1P21675 1872 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
DDX41-211ENST00000510171 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.26
DDX41-211ENST00000510171 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 KSR2Q6VAB6 950 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 PI4KAP1Q8N8J0 262 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
DDX41-211ENST00000510171 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
DDX41-211ENST00000510171 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 PKN2Q16513 984 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms