RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 OCEL1Q9H607 264 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 SALL3Q9BXA9 1300 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
NEK1-205ENST00000510108 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
NEK1-205ENST00000510108 PHF14O94880 888 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 GYS1P13807 737 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
NEK1-205ENST00000510108 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
NEK1-205ENST00000510108 RGS3P49796 1198 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 TTLL11Q8NHH1 800 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 RHPN1Q8TCX5 695 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
NEK1-205ENST00000510108 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 CIAO1O76071 339 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 NFIXQ14938 502 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
NEK1-205ENST00000510108 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
NEK1-205ENST00000510108 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
NEK1-205ENST00000510108 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
NEK1-205ENST00000510108 TM4SF1P30408 202 aa12.58□□□□□ -0.4
NEK1-205ENST00000510108 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
NEK1-205ENST00000510108 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
NEK1-205ENST00000510108 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
NEK1-205ENST00000510108 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
NEK1-205ENST00000510108 AOX1Q06278 1338 aa12.57□□□□□ -0.4
NEK1-205ENST00000510108 A0A1B0GUL6 1792 aa12.57□□□□□ -0.4
NEK1-205ENST00000510108 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
NEK1-205ENST00000510108 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
NEK1-205ENST00000510108 SASH1O94885 1247 aa12.57□□□□□ -0.4
NEK1-205ENST00000510108 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEK1-205ENST00000510108 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
NEK1-205ENST00000510108 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
NEK1-205ENST00000510108 EYA2O00167 538 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
NEK1-205ENST00000510108 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
NEK1-205ENST00000510108 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
NEK1-205ENST00000510108 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 GREM2Q9H772 168 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 STAP2Q9UGK3 403 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
NEK1-205ENST00000510108 ZNF609O15014 1411 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 ANKRD18BA2A2Z9 1011 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
NEK1-205ENST00000510108 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
NEK1-205ENST00000510108 ITGA6P23229 1130 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
NEK1-205ENST00000510108 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 COL4A1P02462 1669 aa12.55□□□□□ -0.4
NEK1-205ENST00000510108 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
NEK1-205ENST00000510108 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 APBB1O00213 710 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 NPHP1O15259 732 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 MX1P20591 662 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 PDE1AP54750 535 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 DDR1Q08345 913 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
NEK1-205ENST00000510108 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
NEK1-205ENST00000510108 CLASRPQ8N2M8 674 aaKnown RBP12.54□□□□□ -0.4
NEK1-205ENST00000510108 OTUD7AQ8TE49 926 aaPredicted RBP12.54□□□□□ -0.4
NEK1-205ENST00000510108 SIL1Q9H173 461 aa12.54□□□□□ -0.4
NEK1-205ENST00000510108 POLD1P28340 1107 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
NEK1-205ENST00000510108 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
NEK1-205ENST00000510108 SERPINB2P05120 415 aa12.52□□□□□ -0.41
NEK1-205ENST00000510108 GSPT1P15170 499 aaKnown RBP12.52□□□□□ -0.41
NEK1-205ENST00000510108 LRRC24Q50LG9 513 aa12.52□□□□□ -0.41
NEK1-205ENST00000510108 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
NEK1-205ENST00000510108 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
NEK1-205ENST00000510108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
NEK1-205ENST00000510108 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
NEK1-205ENST00000510108 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
NEK1-205ENST00000510108 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
NEK1-205ENST00000510108 ST5P78524 1137 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms