RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
RAB40C-202ENST00000509637 CDC37L1Q7L3B6 337 aa20.71■□□□□ 0.91
RAB40C-202ENST00000509637 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
RAB40C-202ENST00000509637 ZBTB38Q8NAP3 1195 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-202ENST00000509637 MYD88Q99836 296 aa20.7■□□□□ 0.9
RAB40C-202ENST00000509637 CASP8AP2Q9UKL3 1982 aa20.7■□□□□ 0.9
RAB40C-202ENST00000509637 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
RAB40C-202ENST00000509637 H7C1D1 291 aa20.69■□□□□ 0.9
RAB40C-202ENST00000509637 RBM26Q5T8P6 1007 aaKnown RBP20.69■□□□□ 0.9
RAB40C-202ENST00000509637 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
RAB40C-202ENST00000509637 CCDC85AQ96PX6 553 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-202ENST00000509637 FAM155AB1AL88 458 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-202ENST00000509637 RIC3Q7Z5B4 369 aa20.68■□□□□ 0.9
RAB40C-202ENST00000509637 PODXL2Q9NZ53 605 aa20.68■□□□□ 0.9
RAB40C-202ENST00000509637 VIL1P09327 827 aaKnown RBP20.67■□□□□ 0.9
RAB40C-202ENST00000509637 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
RAB40C-202ENST00000509637 PCCAP05165 728 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-202ENST00000509637 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
RAB40C-202ENST00000509637 KRT26Q7Z3Y9 468 aa20.65■□□□□ 0.9
RAB40C-202ENST00000509637 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-202ENST00000509637 HUNKP57058 714 aa20.64■□□□□ 0.89
RAB40C-202ENST00000509637 CCDC191Q8NCU4 936 aa20.64■□□□□ 0.89
RAB40C-202ENST00000509637 GMLQ99445 158 aa20.64■□□□□ 0.89
RAB40C-202ENST00000509637 UFL1O94874 794 aa20.63■□□□□ 0.89
RAB40C-202ENST00000509637 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-202ENST00000509637 GNAI1P63096 354 aa20.63■□□□□ 0.89
RAB40C-202ENST00000509637 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
RAB40C-202ENST00000509637 PDE8AO60658 829 aa20.62■□□□□ 0.89
RAB40C-202ENST00000509637 RPS12P25398 132 aaKnown RBP20.62■□□□□ 0.89
RAB40C-202ENST00000509637 KIF4BQ2VIQ3 1234 aa20.62■□□□□ 0.89
RAB40C-202ENST00000509637 G2E3Q7L622 706 aa20.62■□□□□ 0.89
RAB40C-202ENST00000509637 EYA3Q99504 573 aa20.62■□□□□ 0.89
RAB40C-202ENST00000509637 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
RAB40C-202ENST00000509637 SCAF8Q9UPN6 1271 aaKnown RBP20.62■□□□□ 0.89
RAB40C-202ENST00000509637 ZNF280AP59817 542 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-202ENST00000509637 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
RAB40C-202ENST00000509637 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
RAB40C-202ENST00000509637 MCOLN1Q9GZU1 580 aa20.61■□□□□ 0.89
RAB40C-202ENST00000509637 GBA2Q9HCG7 927 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-202ENST00000509637 CWC25Q9NXE8 425 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-202ENST00000509637 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
RAB40C-202ENST00000509637 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
RAB40C-202ENST00000509637 MXD3Q9BW11 206 aa20.6■□□□□ 0.89
RAB40C-202ENST00000509637 GGA3Q9NZ52 723 aa20.6■□□□□ 0.89
RAB40C-202ENST00000509637 GGA1Q9UJY5 639 aa20.6■□□□□ 0.89
RAB40C-202ENST00000509637 CCDC85CA6NKD9 419 aa20.59■□□□□ 0.89
RAB40C-202ENST00000509637 RGMBQ6NW40 437 aa20.59■□□□□ 0.89
RAB40C-202ENST00000509637 TTLL11Q8NHH1 800 aa20.59■□□□□ 0.89
RAB40C-202ENST00000509637 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
RAB40C-202ENST00000509637 ZNF646O15015 1829 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-202ENST00000509637 PSME4Q14997 1843 aa20.59■□□□□ 0.89
RAB40C-202ENST00000509637 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 RGS19P49795 217 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 KIF23Q02241 960 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-202ENST00000509637 NOGQ13253 232 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
RAB40C-202ENST00000509637 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-202ENST00000509637 TXNRD3Q86VQ6 643 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.89
RAB40C-202ENST00000509637 DCPSQ96C86 337 aaKnown RBP20.58■□□□□ 0.89
RAB40C-202ENST00000509637 ZNF609O15014 1411 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 SCARF1Q14162 830 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 MOB2Q70IA6 237 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 CDCA5Q96FF9 252 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 GREM2Q9H772 168 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 MINPP1Q9UNW1 487 aa20.57■□□□□ 0.88
RAB40C-202ENST00000509637 CTSWP56202 376 aa20.56■□□□□ 0.88
RAB40C-202ENST00000509637 ANGEL2Q5VTE6 544 aaKnown RBP20.56■□□□□ 0.88
RAB40C-202ENST00000509637 CCDC30Q5VVM6 783 aa20.56■□□□□ 0.88
RAB40C-202ENST00000509637 CA12O43570 354 aa20.55■□□□□ 0.88
RAB40C-202ENST00000509637 PRAMEF18Q5VWM3 479 aa20.55■□□□□ 0.88
RAB40C-202ENST00000509637 ANKRD18AQ8IVF6 992 aa20.55■□□□□ 0.88
RAB40C-202ENST00000509637 C2orf69Q8N8R5 385 aa20.55■□□□□ 0.88
RAB40C-202ENST00000509637 CSRNP1Q96S65 589 aa20.55■□□□□ 0.88
RAB40C-202ENST00000509637 XDHP47989 1333 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 H7C1W4 665 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 KLRK1P26718 216 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 CASP7P55210 303 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 AGBL3Q8NEM8 1001 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 SPEF2Q9C093 1822 aa20.54■□□□□ 0.88
RAB40C-202ENST00000509637 NEURL1BA8MQ27 555 aa20.53■□□□□ 0.88
RAB40C-202ENST00000509637 SLC10A3P09131 477 aa20.53■□□□□ 0.88
RAB40C-202ENST00000509637 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
RAB40C-202ENST00000509637 ZNF157P51786 506 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-202ENST00000509637 DGKZQ13574 1117 aa20.53■□□□□ 0.88
RAB40C-202ENST00000509637 NBPF9Q3BBW0 867 aa20.53■□□□□ 0.88
RAB40C-202ENST00000509637 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
RAB40C-202ENST00000509637 DACT2Q5SW24 774 aa20.52■□□□□ 0.88
RAB40C-202ENST00000509637 SULF1Q8IWU6 871 aa20.52■□□□□ 0.88
RAB40C-202ENST00000509637 WWC1Q8IX03 1113 aa20.52■□□□□ 0.88
RAB40C-202ENST00000509637 MYOZ2Q9NPC6 264 aa20.52■□□□□ 0.88
RAB40C-202ENST00000509637 BSDC1Q9NW68 430 aaPredicted RBP20.52■□□□□ 0.88
RAB40C-202ENST00000509637 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
RAB40C-202ENST00000509637 USP17L4A6NCW7 530 aa20.51■□□□□ 0.87
RAB40C-202ENST00000509637 TRPA1O75762 1119 aa20.51■□□□□ 0.87
RAB40C-202ENST00000509637 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
RAB40C-202ENST00000509637 USP17L1Q7RTZ2 530 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms