RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 LARGE2Q8N3Y3 721 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
NDFIP1-204ENST00000509436 TRPA1O75762 1119 aa20.33■□□□□ 0.85
NDFIP1-204ENST00000509436 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.85
NDFIP1-204ENST00000509436 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
NDFIP1-204ENST00000509436 PLBD2Q8NHP8 589 aa20.33■□□□□ 0.85
NDFIP1-204ENST00000509436 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
NDFIP1-204ENST00000509436 FXR1P51114 621 aaKnown RBP eCLIP20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 RGMBQ6NW40 437 aa20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 NUP98P52948 1817 aa20.32■□□□□ 0.84
NDFIP1-204ENST00000509436 SZT2Q5T011 3432 aa20.31■□□□□ 0.84
NDFIP1-204ENST00000509436 CDHR2Q9BYE9 1310 aa20.31■□□□□ 0.84
NDFIP1-204ENST00000509436 RGL2O15211 777 aa20.31■□□□□ 0.84
NDFIP1-204ENST00000509436 NEXNQ0ZGT2 675 aa20.31■□□□□ 0.84
NDFIP1-204ENST00000509436 TTLL7Q6ZT98 887 aa20.31■□□□□ 0.84
NDFIP1-204ENST00000509436 PKN2Q16513 984 aaKnown RBP20.3■□□□□ 0.84
NDFIP1-204ENST00000509436 NIM1KQ8IY84 436 aa20.3■□□□□ 0.84
NDFIP1-204ENST00000509436 EXOC6Q8TAG9 804 aa20.3■□□□□ 0.84
NDFIP1-204ENST00000509436 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
NDFIP1-204ENST00000509436 GTF3C3Q9Y5Q9 886 aa20.3■□□□□ 0.84
NDFIP1-204ENST00000509436 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
NDFIP1-204ENST00000509436 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
NDFIP1-204ENST00000509436 GMPSP49915 693 aaPredicted RBP20.29■□□□□ 0.84
NDFIP1-204ENST00000509436 CCDC102AQ96A19 550 aa20.29■□□□□ 0.84
NDFIP1-204ENST00000509436 RIC1Q4ADV7 1423 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 CXCL9Q07325 125 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 AAMPQ13685 434 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 SRCIN1Q9C0H9 1055 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
NDFIP1-204ENST00000509436 ABCC12Q96J65 1359 aa20.27■□□□□ 0.84
NDFIP1-204ENST00000509436 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
NDFIP1-204ENST00000509436 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
NDFIP1-204ENST00000509436 CSRNP1Q96S65 589 aa20.27■□□□□ 0.84
NDFIP1-204ENST00000509436 HTTP42858 3142 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 BEND3Q5T5X7 828 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 LINS1Q8NG48 757 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 TRPM4Q8TD43 1214 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 MYD88Q99836 296 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
NDFIP1-204ENST00000509436 DLK2Q6UY11 383 aa20.25■□□□□ 0.83
NDFIP1-204ENST00000509436 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
NDFIP1-204ENST00000509436 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
NDFIP1-204ENST00000509436 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
NDFIP1-204ENST00000509436 SLC10A3P09131 477 aa20.24■□□□□ 0.83
NDFIP1-204ENST00000509436 AOC3Q16853 763 aa20.24■□□□□ 0.83
NDFIP1-204ENST00000509436 GIGYF2Q6Y7W6 1299 aaKnown RBP20.24■□□□□ 0.83
NDFIP1-204ENST00000509436 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
NDFIP1-204ENST00000509436 ZNF157P51786 506 aaPredicted RBP20.23■□□□□ 0.83
NDFIP1-204ENST00000509436 GBA2Q9HCG7 927 aaPredicted RBP20.23■□□□□ 0.83
NDFIP1-204ENST00000509436 POLR2AP24928 1970 aaKnown RBP20.23■□□□□ 0.83
NDFIP1-204ENST00000509436 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
NDFIP1-204ENST00000509436 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
NDFIP1-204ENST00000509436 BRCA2P51587 3418 aa20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 NEURL1BA8MQ27 555 aa20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 ZBTB7BO15156 539 aaPredicted RBP20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 GNAI3P08754 354 aa20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
NDFIP1-204ENST00000509436 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 IGKV5-2P06315 115 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 HLFQ16534 295 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 C2orf69Q8N8R5 385 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 PPP4R2Q9NY27 417 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 CENPFP49454 3210 aa20.2■□□□□ 0.82
NDFIP1-204ENST00000509436 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 FBXO46Q6PJ61 603 aaPredicted RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 ZBTB40Q9NUA8 1239 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 CWC25Q9NXE8 425 aaPredicted RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 HDAC5Q9UQL6 1122 aa20.19■□□□□ 0.82
NDFIP1-204ENST00000509436 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
NDFIP1-204ENST00000509436 GCKRQ14397 625 aa20.18■□□□□ 0.82
NDFIP1-204ENST00000509436 ZNF296Q8WUU4 475 aaPredicted RBP20.18■□□□□ 0.82
NDFIP1-204ENST00000509436 MEIS3Q99687 375 aa20.18■□□□□ 0.82
NDFIP1-204ENST00000509436 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
NDFIP1-204ENST00000509436 UBTFL1P0CB47 393 aaPredicted RBP20.17■□□□□ 0.82
NDFIP1-204ENST00000509436 NUTM1Q86Y26 1132 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms