RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RAP1GAPP47736 663 aa7.56□□□□□ -1.2
NIPBL-206ENST00000509429 HAP1P54257 671 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-206ENST00000509429 IER5Q5VY09 327 aa7.56□□□□□ -1.2
NIPBL-206ENST00000509429 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
NIPBL-206ENST00000509429 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
NIPBL-206ENST00000509429 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
NIPBL-206ENST00000509429 ZSCAN22P10073 491 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-206ENST00000509429 KRTAP1-1Q07627 177 aa7.55□□□□□ -1.2
NIPBL-206ENST00000509429 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-206ENST00000509429 LRRC56Q8IYG6 542 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-206ENST00000509429 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
NIPBL-206ENST00000509429 CYP26A1O43174 497 aa7.54□□□□□ -1.2
NIPBL-206ENST00000509429 RARAP10276 462 aa7.54□□□□□ -1.2
NIPBL-206ENST00000509429 EPB42P16452 691 aa7.54□□□□□ -1.2
NIPBL-206ENST00000509429 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-206ENST00000509429 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
NIPBL-206ENST00000509429 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
NIPBL-206ENST00000509429 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
NIPBL-206ENST00000509429 PREPP48147 710 aa7.52□□□□□ -1.21
NIPBL-206ENST00000509429 ECM1Q16610 540 aa7.52□□□□□ -1.21
NIPBL-206ENST00000509429 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
NIPBL-206ENST00000509429 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
NIPBL-206ENST00000509429 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 LINC01387J3KSC0 135 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 J3QW42 95 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 APBB1O00213 710 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 PSPNO60542 156 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 MAP4P27816 1152 aaKnown RBP7.51□□□□□ -1.21
NIPBL-206ENST00000509429 SIK1P57059 783 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 PSME1Q06323 249 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 RTN1Q16799 776 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 DBX2Q6ZNG2 339 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 MTMR14Q8NCE2 650 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 C11orf16Q9NQ32 467 aa7.51□□□□□ -1.21
NIPBL-206ENST00000509429 TM4SF5O14894 197 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
NIPBL-206ENST00000509429 SASH3O75995 380 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 GHRHP01286 108 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 GTF2IP78347 998 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 TSPAN10Q9H1Z9 355 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-206ENST00000509429 TRIM33Q9UPN9 1127 aa7.5□□□□□ -1.21
NIPBL-206ENST00000509429 CTSWP56202 376 aa7.49□□□□□ -1.21
NIPBL-206ENST00000509429 PCMTD1Q96MG8 357 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-206ENST00000509429 RBSNQ9H1K0 784 aa7.49□□□□□ -1.21
NIPBL-206ENST00000509429 KDM4CQ9H3R0 1056 aa7.49□□□□□ -1.21
NIPBL-206ENST00000509429 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
NIPBL-206ENST00000509429 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
NIPBL-206ENST00000509429 NOD1Q9Y239 953 aa7.49□□□□□ -1.21
NIPBL-206ENST00000509429 TGFBR3LH3BV60 316 aa7.48□□□□□ -1.21
NIPBL-206ENST00000509429 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
NIPBL-206ENST00000509429 TSPAN15O95858 294 aa7.47□□□□□ -1.21
NIPBL-206ENST00000509429 EML3Q32P44 896 aa7.47□□□□□ -1.21
NIPBL-206ENST00000509429 KLHL23Q8NBE8 558 aa7.47□□□□□ -1.21
NIPBL-206ENST00000509429 BANK1Q8NDB2 785 aa7.47□□□□□ -1.21
NIPBL-206ENST00000509429 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.22
NIPBL-206ENST00000509429 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
NIPBL-206ENST00000509429 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
NIPBL-206ENST00000509429 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
NIPBL-206ENST00000509429 INPP5BP32019 993 aa7.45□□□□□ -1.22
NIPBL-206ENST00000509429 UBASH3BQ8TF42 649 aa7.45□□□□□ -1.22
NIPBL-206ENST00000509429 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
NIPBL-206ENST00000509429 LRRC10BA6NIK2 292 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 INHBBP09529 407 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 SKIP12755 728 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 SGO2Q562F6 1265 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 TXNDC11Q6PKC3 985 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-206ENST00000509429 PPP1R16BQ96T49 567 aa7.44□□□□□ -1.22
NIPBL-206ENST00000509429 RXRBP28702 533 aa7.43□□□□□ -1.22
NIPBL-206ENST00000509429 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
NIPBL-206ENST00000509429 CARD10Q9BWT7 1032 aa7.43□□□□□ -1.22
NIPBL-206ENST00000509429 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
NIPBL-206ENST00000509429 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-206ENST00000509429 BCS1LQ9Y276 419 aa7.43□□□□□ -1.22
NIPBL-206ENST00000509429 FSCN2O14926 492 aa7.42□□□□□ -1.22
NIPBL-206ENST00000509429 DDX3YO15523 660 aaKnown RBP7.42□□□□□ -1.22
NIPBL-206ENST00000509429 PSAPP07602 524 aa7.42□□□□□ -1.22
NIPBL-206ENST00000509429 AMIGO3Q86WK7 504 aa7.42□□□□□ -1.22
NIPBL-206ENST00000509429 BCL7CQ8WUZ0 217 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-206ENST00000509429 ZC3H7BQ9UGR2 993 aaKnown RBP7.42□□□□□ -1.22
NIPBL-206ENST00000509429 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-206ENST00000509429 ADAM11O75078 769 aa7.41□□□□□ -1.22
NIPBL-206ENST00000509429 CRTC2Q53ET0 693 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-206ENST00000509429 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
NIPBL-206ENST00000509429 ADAM19Q9H013 955 aa7.41□□□□□ -1.22
NIPBL-206ENST00000509429 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
NIPBL-206ENST00000509429 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
NIPBL-206ENST00000509429 LZTS3O60299 673 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-206ENST00000509429 HOXD8P13378 290 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-206ENST00000509429 IDH3AP50213 366 aa7.4□□□□□ -1.22
NIPBL-206ENST00000509429 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-206ENST00000509429 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
NIPBL-206ENST00000509429 STAG2Q8N3U4 1231 aa7.4□□□□□ -1.22
NIPBL-206ENST00000509429 NGLY1Q96IV0 654 aa7.4□□□□□ -1.22
NIPBL-206ENST00000509429 FAM95CA0A1B0GW59 222 aa7.39□□□□□ -1.23
NIPBL-206ENST00000509429 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
NIPBL-206ENST00000509429 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
NIPBL-206ENST00000509429 PAOXQ6QHF9 649 aa7.39□□□□□ -1.23
NIPBL-206ENST00000509429 WFDC3Q8IUB2 231 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms