RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 A0A1B0GUL6 1792 aa25.3■■□□□ 1.64
HOXC6-204ENST00000509328 XDHP47989 1333 aa25.29■■□□□ 1.64
HOXC6-204ENST00000509328 PPIP5K2O43314 1243 aa25.28■■□□□ 1.64
HOXC6-204ENST00000509328 LARGE2Q8N3Y3 721 aa25.28■■□□□ 1.64
HOXC6-204ENST00000509328 TBC1D16Q8TBP0 767 aa25.28■■□□□ 1.64
HOXC6-204ENST00000509328 JDP2Q8WYK2 163 aa25.28■■□□□ 1.64
HOXC6-204ENST00000509328 POLLQ9UGP5 575 aa25.28■■□□□ 1.64
HOXC6-204ENST00000509328 LRRFIP2Q9Y608 721 aaKnown RBP25.28■■□□□ 1.64
HOXC6-204ENST00000509328 C6orf229H3BNL8 230 aa25.27■■□□□ 1.64
HOXC6-204ENST00000509328 AOC3Q16853 763 aa25.27■■□□□ 1.64
HOXC6-204ENST00000509328 ITPRIPQ8IWB1 547 aa25.27■■□□□ 1.64
HOXC6-204ENST00000509328 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.27■■□□□ 1.64
HOXC6-204ENST00000509328 ZNF594Q96JF6 807 aaPredicted RBP25.27■■□□□ 1.64
HOXC6-204ENST00000509328 GGA1Q9UJY5 639 aa25.27■■□□□ 1.64
HOXC6-204ENST00000509328 COL4A5P29400 1685 aa25.26■■□□□ 1.63
HOXC6-204ENST00000509328 KIAA2012Q0VF49 1180 aa25.26■■□□□ 1.63
HOXC6-204ENST00000509328 PANK1Q8TE04 598 aa25.26■■□□□ 1.63
HOXC6-204ENST00000509328 EYA3Q99504 573 aa25.26■■□□□ 1.63
HOXC6-204ENST00000509328 ANKRD2Q9GZV1 360 aa25.26■■□□□ 1.63
HOXC6-204ENST00000509328 PLIN1O60240 522 aa25.25■■□□□ 1.63
HOXC6-204ENST00000509328 UFL1O94874 794 aa25.25■■□□□ 1.63
HOXC6-204ENST00000509328 ATP2B4P23634 1241 aa25.25■■□□□ 1.63
HOXC6-204ENST00000509328 WASHC4Q2M389 1173 aa25.25■■□□□ 1.63
HOXC6-204ENST00000509328 LDHAL6AQ6ZMR3 332 aa25.25■■□□□ 1.63
HOXC6-204ENST00000509328 NIM1KQ8IY84 436 aa25.24■■□□□ 1.63
HOXC6-204ENST00000509328 ZNF526Q8TF50 670 aaPredicted RBP25.24■■□□□ 1.63
HOXC6-204ENST00000509328 KDM2BQ8NHM5 1336 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 GLTPD2A6NH11 291 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 FZD9O00144 591 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 GNAI2P04899 355 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 CHRNDQ07001 517 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 DPY19L2Q6NUT2 758 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 GPBP1L1Q9HC44 474 aaPredicted RBP25.23■■□□□ 1.63
HOXC6-204ENST00000509328 CNNM1Q9NRU3 951 aa25.23■■□□□ 1.63
HOXC6-204ENST00000509328 LEMD3Q9Y2U8 911 aa25.22■■□□□ 1.63
HOXC6-204ENST00000509328 ZBTB7BO15156 539 aaPredicted RBP25.21■■□□□ 1.63
HOXC6-204ENST00000509328 ZC3H12CQ9C0D7 883 aaKnown RBP25.21■■□□□ 1.63
HOXC6-204ENST00000509328 RIMBP2O15034 1052 aa25.2■■□□□ 1.62
HOXC6-204ENST00000509328 RFX5P48382 616 aaPredicted RBP25.2■■□□□ 1.62
HOXC6-204ENST00000509328 PDE3AQ14432 1141 aa25.2■■□□□ 1.62
HOXC6-204ENST00000509328 GPR101Q96P66 508 aaPredicted RBP25.2■■□□□ 1.62
HOXC6-204ENST00000509328 ZNRF3Q9ULT6 936 aa25.2■■□□□ 1.62
HOXC6-204ENST00000509328 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
HOXC6-204ENST00000509328 EIF6P56537 245 aaKnown RBP25.19■■□□□ 1.62
HOXC6-204ENST00000509328 MTX1Q13505 466 aa25.19■■□□□ 1.62
HOXC6-204ENST00000509328 MVPQ14764 893 aaKnown RBP25.19■■□□□ 1.62
HOXC6-204ENST00000509328 PUS3Q9BZE2 481 aaKnown RBP25.19■■□□□ 1.62
HOXC6-204ENST00000509328 WDR90Q96KV7 1748 aa25.19■■□□□ 1.62
HOXC6-204ENST00000509328 ZNF804BA4D1E1 1349 aa25.18■■□□□ 1.62
HOXC6-204ENST00000509328 KLHDC4Q8TBB5 520 aa25.18■■□□□ 1.62
HOXC6-204ENST00000509328 RIPOR2Q9Y4F9 1068 aa25.18■■□□□ 1.62
HOXC6-204ENST00000509328 MED23Q9ULK4 1368 aa25.18■■□□□ 1.62
HOXC6-204ENST00000509328 MROH5Q6ZUA9 1318 aa25.17■■□□□ 1.62
HOXC6-204ENST00000509328 PTPN12Q05209 780 aaKnown RBP25.17■■□□□ 1.62
HOXC6-204ENST00000509328 HELBQ8NG08 1087 aaPredicted RBP25.17■■□□□ 1.62
HOXC6-204ENST00000509328 DDX19BQ9UMR2 479 aa25.17■■□□□ 1.62
HOXC6-204ENST00000509328 COG6Q9Y2V7 657 aa25.17■■□□□ 1.62
HOXC6-204ENST00000509328 WTIPA6NIX2 430 aaPredicted RBP25.16■■□□□ 1.62
HOXC6-204ENST00000509328 SRGAP3O43295 1099 aa25.16■■□□□ 1.62
HOXC6-204ENST00000509328 TAF5LO75529 589 aa25.16■■□□□ 1.62
HOXC6-204ENST00000509328 DDNO94850 711 aaPredicted RBP25.16■■□□□ 1.62
HOXC6-204ENST00000509328 KCNJ4P48050 445 aa25.16■■□□□ 1.62
HOXC6-204ENST00000509328 LRRC24Q50LG9 513 aa25.16■■□□□ 1.62
HOXC6-204ENST00000509328 GPC2Q8N158 579 aa25.15■■□□□ 1.62
HOXC6-204ENST00000509328 DBNDD1Q9H9R9 158 aa25.15■■□□□ 1.62
HOXC6-204ENST00000509328 FBXO3Q9UK99 471 aa25.15■■□□□ 1.62
HOXC6-204ENST00000509328 SCN4AP35499 1836 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 G3V3G9 751 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 EYA2O00167 538 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 ECE2O60344 883 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 DOK7Q18PE1 504 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 DCAF8Q5TAQ9 597 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 C20orf194Q5TEA3 1177 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
HOXC6-204ENST00000509328 NMRK2Q9NPI5 230 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 COPRSQ9NQ92 184 aa25.14■■□□□ 1.62
HOXC6-204ENST00000509328 PSME4Q14997 1843 aa25.14■■□□□ 1.61
HOXC6-204ENST00000509328 SCN9AQ15858 1988 aa25.13■■□□□ 1.61
HOXC6-204ENST00000509328 YDJCA8MPS7 323 aa25.13■■□□□ 1.61
HOXC6-204ENST00000509328 METTL24Q5JXM2 366 aa25.13■■□□□ 1.61
HOXC6-204ENST00000509328 C1orf115Q9H7X2 142 aa25.13■■□□□ 1.61
HOXC6-204ENST00000509328 CIAO1O76071 339 aa25.12■■□□□ 1.61
HOXC6-204ENST00000509328 RRP1P56182 461 aaKnown RBP25.12■■□□□ 1.61
HOXC6-204ENST00000509328 CXCL9Q07325 125 aa25.12■■□□□ 1.61
HOXC6-204ENST00000509328 L3MBTL3Q96JM7 780 aaPredicted RBP25.12■■□□□ 1.61
HOXC6-204ENST00000509328 RRAGCQ9HB90 399 aa25.12■■□□□ 1.61
HOXC6-204ENST00000509328 UBE4AQ14139 1066 aa25.11■■□□□ 1.61
HOXC6-204ENST00000509328 TNIP1Q15025 636 aa25.11■■□□□ 1.61
HOXC6-204ENST00000509328 CIAPIN1Q6FI81 312 aa25.11■■□□□ 1.61
HOXC6-204ENST00000509328 C15orf52Q6ZUT6 534 aaKnown RBP25.11■■□□□ 1.61
HOXC6-204ENST00000509328 SIL1Q9H173 461 aa25.11■■□□□ 1.61
HOXC6-204ENST00000509328 GJA3Q9Y6H8 435 aa25.11■■□□□ 1.61
HOXC6-204ENST00000509328 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 SNAP23O00161 211 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 PDE8BO95263 885 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
HOXC6-204ENST00000509328 ATP8B2P98198 1209 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 ATG9AQ7Z3C6 839 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 TXNRD3Q86VQ6 643 aa25.1■■□□□ 1.61
HOXC6-204ENST00000509328 VGLL2Q8N8G2 317 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms