RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	ZC3H15	Q8WU90	426 aa	Known RBP	13.91	□□□□□ -0.18
TUSC3-208	ENST00000509177	ZNF408	Q9H9D4	720 aa		13.91	□□□□□ -0.18
TUSC3-208	ENST00000509177	MAP3K2	Q9Y2U5	619 aa		13.91	□□□□□ -0.18
TUSC3-208	ENST00000509177	LAMB2	P55268	1798 aa		13.91	□□□□□ -0.18
TUSC3-208	ENST00000509177	YDJC	A8MPS7	323 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	SLC4A2	P04920	1241 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	NEXN	Q0ZGT2	675 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	DLK2	Q6UY11	383 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	MPND	Q8N594	471 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	CCDC191	Q8NCU4	936 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	ZIC5	Q96T25	663 aa		13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	METTL22	Q9BUU2	404 aa	Predicted RBP	13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	CWC25	Q9NXE8	425 aa	Predicted RBP	13.9	□□□□□ -0.18
TUSC3-208	ENST00000509177	ANKRD36C	Q5JPF3	1778 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	TNIP1	Q15025	636 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	SF3B3	Q15393	1217 aa	Known RBP	13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	KSR2	Q6VAB6	950 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	CDC37L1	Q7L3B6	337 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	TMC4	Q7Z404	712 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	BCL2L13	Q9BXK5	485 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	CNOT7	Q9UIV1	285 aa	Known RBP	13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	FANCI	Q9NVI1	1328 aa		13.89	□□□□□ -0.19
TUSC3-208	ENST00000509177	DUOX1	Q9NRD9	1551 aa		13.88	□□□□□ -0.19
TUSC3-208	ENST00000509177	PI4KAP2	A4QPH2	592 aa		13.88	□□□□□ -0.19
TUSC3-208	ENST00000509177	PI4KAP1	Q8N8J0	262 aa		13.88	□□□□□ -0.19
TUSC3-208	ENST00000509177	JARID2	Q92833	1246 aa	Predicted RBP	13.88	□□□□□ -0.19
TUSC3-208	ENST00000509177	TAF1	P21675	1872 aa		13.88	□□□□□ -0.19
TUSC3-208	ENST00000509177	PCCA	P05165	728 aa	Predicted RBP	13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	EXOSC9	Q06265	439 aa	Known RBP	13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	USP48	Q86UV5	1035 aa		13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	MICALL2	Q8IY33	904 aa		13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	CELF1	Q92879	486 aa	Known RBP	13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	MYH16	Q9H6N6	1097 aa		13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.87	□□□□□ -0.19
TUSC3-208	ENST00000509177		H7C1D1	291 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	PDE8A	O60658	829 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	EGFR	P00533	1210 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	HUNK	P57058	714 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	RPS8	P62241	208 aa	Known RBP	13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	NOG	Q13253	232 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	DGKZ	Q13574	1117 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	CCDC152	Q4G0S7	254 aa		13.86	□□□□□ -0.19
TUSC3-208	ENST00000509177	LRRC37A	A6NMS7	1700 aa		13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	C6orf229	H3BNL8	230 aa		13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	FKBP5	Q13451	457 aa	Predicted RBP	13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	G2E3	Q7L622	706 aa		13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	SAMD7	Q7Z3H4	446 aa		13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.85	□□□□□ -0.19
TUSC3-208	ENST00000509177	FAM155A	B1AL88	458 aa	Predicted RBP	13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	PSMD14	O00487	310 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	VAMP4	O75379	141 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	FLII	Q13045	1269 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	DPF2	Q92785	391 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	SEC31B	Q9NQW1	1179 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	PDE4DIP	Q5VU43	2346 aa		13.84	□□□□□ -0.19
TUSC3-208	ENST00000509177	COL4A1	P02462	1669 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	RIMBP2	O15034	1052 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	IGKV5-2	P06315	115 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	WASHC4	Q2M389	1173 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	CWF19L2	Q2TBE0	894 aa	Known RBP	13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	RGMB	Q6NW40	437 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	KRT26	Q7Z3Y9	468 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	DBNDD1	Q9H9R9	158 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	KCNQ5	Q9NR82	932 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	ANKIB1	Q9P2G1	1089 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	RTL9	Q8NET4	1388 aa		13.83	□□□□□ -0.2
TUSC3-208	ENST00000509177	DDX60	Q8IY21	1712 aa	Known RBP	13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	NEURL1B	A8MQ27	555 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	ADM5	C9JUS6	153 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177		G3V3G9	751 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	GPSM2	P81274	684 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	DCAF8	Q5TAQ9	597 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	ANKRD18A	Q8IVF6	992 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	DNAAF4	Q8WXU2	420 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	EYA3	Q99504	573 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	GBA2	Q9HCG7	927 aa	Predicted RBP	13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	POLL	Q9UGP5	575 aa		13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	POLR2A	P24928	1970 aa	Known RBP	13.82	□□□□□ -0.2
TUSC3-208	ENST00000509177	CTSW	P56202	376 aa		13.81	□□□□□ -0.2
TUSC3-208	ENST00000509177	RBM26	Q5T8P6	1007 aa	Known RBP	13.81	□□□□□ -0.2
TUSC3-208	ENST00000509177	UBE3B	Q7Z3V4	1068 aa		13.81	□□□□□ -0.2
TUSC3-208	ENST00000509177	CDC5L	Q99459	802 aa	Known RBP	13.81	□□□□□ -0.2
TUSC3-208	ENST00000509177	SAGE1	Q9NXZ1	904 aa		13.81	□□□□□ -0.2
TUSC3-208	ENST00000509177	ECE2	O60344	883 aa		13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	RPS12	P25398	132 aa	Known RBP	13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	KIF23	Q02241	960 aa	Predicted RBP	13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	GCKR	Q14397	625 aa		13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	DOK7	Q18PE1	504 aa		13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	C2orf69	Q8N8R5	385 aa		13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	GGA1	Q9UJY5	639 aa		13.8	□□□□□ -0.2
TUSC3-208	ENST00000509177	TRPA1	O75762	1119 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	UFL1	O94874	794 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	ZNF157	P51786	506 aa	Predicted RBP	13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	LINS1	Q8NG48	757 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	TTLL11	Q8NHH1	800 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms