RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 BCL2L13Q9BXK5 485 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 MYH16Q9H6N6 1097 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 TNNQ9UQP3 1299 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 MAP3K2Q9Y2U5 619 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 ZNF646O15015 1829 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 PI4KAP2A4QPH2 592 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 SEMA3EO15041 775 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 SLC34A2O95436 690 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 HCLS1P14317 486 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 ST5P78524 1137 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 CWF19L2Q2TBE0 894 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 PARP10Q53GL7 1025 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 PRPF40BQ6NWY9 871 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 PI4KAP1Q8N8J0 262 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 ABCC4O15439 1325 aa9.27□□□□□ -0.93
TOPBP1-207ENST00000509162 NEURL1BA8MQ27 555 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 HNRNPUQ00839 825 aaKnown RBP eCLIP9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 SLC10A5Q5PT55 438 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 UTP14AQ9BVJ6 771 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 PIM2Q9P1W9 311 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 MYH3P11055 1940 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 ZBED9Q6R2W3 1325 aa9.26□□□□□ -0.93
TOPBP1-207ENST00000509162 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 HSP90AB3PQ58FF7 597 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 SH3TC1Q8TE82 1336 aa9.25□□□□□ -0.93
TOPBP1-207ENST00000509162 H0YIN7 160 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 C21orf2O43822 256 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 PDE6BP35913 854 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 RIC3Q7Z5B4 369 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 STK31Q9BXU1 1019 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 NYXQ9GZU5 481 aa9.24□□□□□ -0.93
TOPBP1-207ENST00000509162 ZMYND10O75800 440 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 PCCAP05165 728 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 NPR1P16066 1061 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 YY1P25490 414 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 RARSP54136 660 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 CAMK2BQ13554 666 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 EPHA10Q5JZY3 1008 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 VARS2Q5ST30 1063 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 CELF1Q92879 486 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 KAZALD1Q96I82 304 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 CDHR2Q9BYE9 1310 aa9.23□□□□□ -0.93
TOPBP1-207ENST00000509162 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 GCKRQ14397 625 aa9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 PPP1R42Q7Z4L9 355 aa9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 ZBTB38Q8NAP3 1195 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 SEC31BQ9NQW1 1179 aa9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 CWC25Q9NXE8 425 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-207ENST00000509162 H7C1W4 665 aa9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 C9orf131Q5VYM1 1079 aa9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 SLC24A3Q9HC58 644 aa9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 LTBP3Q9NS15 1303 aa9.21□□□□□ -0.94
TOPBP1-207ENST00000509162 WDR90Q96KV7 1748 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 NPHP1O15259 732 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 BCAR3O75815 825 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 DDX58O95786 925 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 PDE4AP27815 886 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 CTSWP56202 376 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 FOXK1P85037 733 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 FAM161AQ3B820 660 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 UBE3BQ7Z3V4 1068 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 LINS1Q8NG48 757 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 CRAMP1Q96RY5 1269 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms