RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
SEC31A-228ENST00000509142 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
SEC31A-228ENST00000509142 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
SEC31A-228ENST00000509142 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
SEC31A-228ENST00000509142 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 CCDC158Q5M9N0 1113 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 GOLGA6L4A6NEF3 574 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 PTMAP06454 111 aaKnown RBP12.99□□□□□ -0.33
SEC31A-228ENST00000509142 TERF1P54274 439 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
SEC31A-228ENST00000509142 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 PUS3Q9BZE2 481 aaKnown RBP12.99□□□□□ -0.33
SEC31A-228ENST00000509142 GPR108Q9NPR9 543 aa12.99□□□□□ -0.33
SEC31A-228ENST00000509142 MCM5P33992 734 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 KRT85P78386 507 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
SEC31A-228ENST00000509142 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
SEC31A-228ENST00000509142 ADCY5O95622 1261 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 Q6ZUG5 572 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 UQCRHP07919 91 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 GPTP24298 496 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
SEC31A-228ENST00000509142 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 PKD1L3Q7Z443 1732 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 FAM184AQ8NB25 1140 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
SEC31A-228ENST00000509142 H3BQV1 296 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
SEC31A-228ENST00000509142 TOB2Q14106 344 aaPredicted RBP12.97□□□□□ -0.33
SEC31A-228ENST00000509142 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 ZNF609O15014 1411 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 CYP21A2P08686 494 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 PIGBQ92521 554 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 BRF1Q92994 677 aa12.97□□□□□ -0.33
SEC31A-228ENST00000509142 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
SEC31A-228ENST00000509142 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
SEC31A-228ENST00000509142 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
SEC31A-228ENST00000509142 RFX7Q2KHR2 1363 aa12.96□□□□□ -0.33
SEC31A-228ENST00000509142 CIAO1O76071 339 aa12.96□□□□□ -0.33
SEC31A-228ENST00000509142 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
SEC31A-228ENST00000509142 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.34
SEC31A-228ENST00000509142 PLCB2Q00722 1185 aa12.96□□□□□ -0.34
SEC31A-228ENST00000509142 DDX11Q96FC9 970 aa12.96□□□□□ -0.34
SEC31A-228ENST00000509142 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.34
SEC31A-228ENST00000509142 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.34
SEC31A-228ENST00000509142 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
SEC31A-228ENST00000509142 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
SEC31A-228ENST00000509142 UVSSAQ2YD98 709 aa12.95□□□□□ -0.34
SEC31A-228ENST00000509142 TSC1Q92574 1164 aa12.95□□□□□ -0.34
SEC31A-228ENST00000509142 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
SEC31A-228ENST00000509142 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
SEC31A-228ENST00000509142 KDM4AO75164 1064 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
SEC31A-228ENST00000509142 LIG1P18858 919 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
SEC31A-228ENST00000509142 ZMYM1Q5SVZ6 1142 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
SEC31A-228ENST00000509142 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 KCNF1Q9H3M0 494 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 EXOC5O00471 708 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 JAK2O60674 1132 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 LDHAL6AQ6ZMR3 332 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
SEC31A-228ENST00000509142 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 JCADQ9P266 1359 aa12.94□□□□□ -0.34
SEC31A-228ENST00000509142 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 HSPD1P10809 573 aaKnown RBP12.93□□□□□ -0.34
SEC31A-228ENST00000509142 FOSBP53539 338 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 SCAND2PQ9GZW5 306 aaPredicted RBP12.93□□□□□ -0.34
SEC31A-228ENST00000509142 KIF3AQ9Y496 699 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 ADORA1P30542 326 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
SEC31A-228ENST00000509142 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
SEC31A-228ENST00000509142 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
SEC31A-228ENST00000509142 KIAA2012Q0VF49 1180 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
SEC31A-228ENST00000509142 PIBF1Q8WXW3 757 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 MAST3O60307 1309 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
SEC31A-228ENST00000509142 ATP2B3Q16720 1220 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms