RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
COL4A3BP-206ENST00000508809 WDR90Q96KV7 1748 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 FAM160A2Q8N612 972 aaPredicted RBP11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 RNF181Q9P0P0 153 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
COL4A3BP-206ENST00000508809 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 NDUFV2P19404 249 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 NFIXQ14938 502 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 C16orf71Q8IYS4 520 aaPredicted RBP11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 MRC1P22897 1456 aa11.69□□□□□ -0.54
COL4A3BP-206ENST00000508809 CCDC88AQ3V6T2 1871 aa11.68□□□□□ -0.54
COL4A3BP-206ENST00000508809 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
COL4A3BP-206ENST00000508809 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
COL4A3BP-206ENST00000508809 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
COL4A3BP-206ENST00000508809 SERPINB2P05120 415 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 SLC19A1P41440 591 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 PRELPP51888 382 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 HTRA3P83110 453 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
COL4A3BP-206ENST00000508809 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 SPTLC1O15269 473 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 LMNB1P20700 586 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 MTMR2Q13614 643 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 PRDM9Q9NQV7 894 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 DLEC1Q9Y238 1755 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 COL15A1P39059 1388 aa11.66□□□□□ -0.54
COL4A3BP-206ENST00000508809 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 HMOX1P09601 288 aa11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 MMP16P51512 607 aa11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
COL4A3BP-206ENST00000508809 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 VEGFAP15692 232 aaPredicted RBP11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 RASSF7Q02833 373 aa11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
COL4A3BP-206ENST00000508809 DICER1Q9UPY3 1922 aaKnown RBP11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 A0A087WZG4 1122 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 POTECB2RU33 542 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 H0YIN7 160 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 NFKBIEO00221 500 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 DIAPH1O60610 1272 aaKnown RBP11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 DXOO77932 396 aaKnown RBP11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 STARD3NLO95772 234 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 JUNDP17535 347 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 C2CD5Q86YS7 1000 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
COL4A3BP-206ENST00000508809 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
COL4A3BP-206ENST00000508809 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
COL4A3BP-206ENST00000508809 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
COL4A3BP-206ENST00000508809 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
COL4A3BP-206ENST00000508809 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
COL4A3BP-206ENST00000508809 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 PDE6BP35913 854 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 RPIAP49247 311 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
COL4A3BP-206ENST00000508809 SIPA1L3O60292 1781 aaPredicted RBP11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 CCDC24Q8N4L8 307 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 PRR7Q8TB68 274 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
COL4A3BP-206ENST00000508809 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 TEFQ10587 303 aa11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms