RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.51
RAB28-205ENST00000508274 GCKRQ14397 625 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 GREM2Q9H772 168 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 F6X3S4 739 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 ECE2O60344 883 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 UFL1O94874 794 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 TNIP1Q15025 636 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
RAB28-205ENST00000508274 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 KCNQ5Q9NR82 932 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 ADARB2Q9NS39 739 aaKnown RBP18.25■□□□□ 0.51
RAB28-205ENST00000508274 ANKIB1Q9P2G1 1089 aa18.25■□□□□ 0.51
RAB28-205ENST00000508274 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
RAB28-205ENST00000508274 TMEM88BA6NKF7 163 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 PSMD14O00487 310 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 KCNA4P22459 653 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 CASP7P55210 303 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 EYA3Q99504 573 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 TRPM7Q96QT4 1865 aa18.24■□□□□ 0.51
RAB28-205ENST00000508274 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
RAB28-205ENST00000508274 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
RAB28-205ENST00000508274 GGA1Q9UJY5 639 aa18.23■□□□□ 0.51
RAB28-205ENST00000508274 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
RAB28-205ENST00000508274 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
RAB28-205ENST00000508274 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
RAB28-205ENST00000508274 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
RAB28-205ENST00000508274 PSME4Q14997 1843 aa18.22■□□□□ 0.51
RAB28-205ENST00000508274 TRAF5O00463 557 aa18.21■□□□□ 0.51
RAB28-205ENST00000508274 ZC3H12CQ9C0D7 883 aaKnown RBP18.21■□□□□ 0.51
RAB28-205ENST00000508274 CNOT7Q9UIV1 285 aaKnown RBP18.21■□□□□ 0.51
RAB28-205ENST00000508274 XDHP47989 1333 aa18.21■□□□□ 0.51
RAB28-205ENST00000508274 HIRAP54198 1017 aaPredicted RBP18.21■□□□□ 0.51
RAB28-205ENST00000508274 FAM161AQ3B820 660 aa18.21■□□□□ 0.51
RAB28-205ENST00000508274 MICALL2Q8IY33 904 aa18.21■□□□□ 0.51
RAB28-205ENST00000508274 PLA2G12BQ9BX93 195 aa18.21■□□□□ 0.51
RAB28-205ENST00000508274 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
RAB28-205ENST00000508274 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
RAB28-205ENST00000508274 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
RAB28-205ENST00000508274 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
RAB28-205ENST00000508274 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
RAB28-205ENST00000508274 MINPP1Q9UNW1 487 aa18.19■□□□□ 0.5
RAB28-205ENST00000508274 EGFRP00533 1210 aa18.18■□□□□ 0.5
RAB28-205ENST00000508274 ITGA6P23229 1130 aa18.18■□□□□ 0.5
RAB28-205ENST00000508274 SAMD7Q7Z3H4 446 aa18.18■□□□□ 0.5
RAB28-205ENST00000508274 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
RAB28-205ENST00000508274 POLR2AP24928 1970 aaKnown RBP18.18■□□□□ 0.5
RAB28-205ENST00000508274 G3V3G9 751 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 H7C1D1 291 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 CSF1RP07333 972 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 ATP2B4P23634 1241 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 VEGFBP49765 207 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 DPF2Q92785 391 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
RAB28-205ENST00000508274 ZNF646O15015 1829 aaPredicted RBP18.17■□□□□ 0.5
RAB28-205ENST00000508274 CST9Q5W186 159 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 PGAP2Q9UHJ9 254 aa18.17■□□□□ 0.5
RAB28-205ENST00000508274 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
RAB28-205ENST00000508274 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
RAB28-205ENST00000508274 TBC1D10BQ4KMP7 808 aaPredicted RBP18.16■□□□□ 0.5
RAB28-205ENST00000508274 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
RAB28-205ENST00000508274 RASSF10A6NK89 507 aa18.15■□□□□ 0.5
RAB28-205ENST00000508274 VIL1P09327 827 aaKnown RBP18.15■□□□□ 0.5
RAB28-205ENST00000508274 RPS12P25398 132 aaKnown RBP18.15■□□□□ 0.5
RAB28-205ENST00000508274 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
RAB28-205ENST00000508274 FOXO4P98177 505 aa18.15■□□□□ 0.5
RAB28-205ENST00000508274 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
RAB28-205ENST00000508274 DEFB115Q30KQ5 88 aa18.14■□□□□ 0.49
RAB28-205ENST00000508274 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
RAB28-205ENST00000508274 COL13A1Q5TAT6 717 aaPredicted RBP18.14■□□□□ 0.49
RAB28-205ENST00000508274 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
RAB28-205ENST00000508274 ZC3H15Q8WU90 426 aaKnown RBP18.14■□□□□ 0.49
RAB28-205ENST00000508274 E9PSI1 815 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 RBM26Q5T8P6 1007 aaKnown RBP18.13■□□□□ 0.49
RAB28-205ENST00000508274 DLK2Q6UY11 383 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 TXNRD3Q86VQ6 643 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 GRM8O00222 908 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 KLRK1P26718 216 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 CHMP3Q9Y3E7 222 aa18.13■□□□□ 0.49
RAB28-205ENST00000508274 ANKRD18BA2A2Z9 1011 aa18.12■□□□□ 0.49
RAB28-205ENST00000508274 CELF2O95319 508 aaKnown RBP18.12■□□□□ 0.49
RAB28-205ENST00000508274 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
RAB28-205ENST00000508274 KIF4BQ2VIQ3 1234 aa18.12■□□□□ 0.49
RAB28-205ENST00000508274 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
RAB28-205ENST00000508274 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
RAB28-205ENST00000508274 ZNF408Q9H9D4 720 aa18.12■□□□□ 0.49
RAB28-205ENST00000508274 ZNF609O15014 1411 aa18.12■□□□□ 0.49
RAB28-205ENST00000508274 CHRNDQ07001 517 aa18.11■□□□□ 0.49
RAB28-205ENST00000508274 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
RAB28-205ENST00000508274 CDC37L1Q7L3B6 337 aa18.11■□□□□ 0.49
RAB28-205ENST00000508274 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
RAB28-205ENST00000508274 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
RAB28-205ENST00000508274 ZNF804BA4D1E1 1349 aa18.1■□□□□ 0.49
RAB28-205ENST00000508274 ASTN2O75129 1339 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms