RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 TBC1D20Q96BZ9 403 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 C2orf49Q9BVC5 232 aaPredicted RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 MZF1P28698 734 aaPredicted RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 HOXC13P31276 330 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 ZNF131P52739 623 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 CLDN10P78369 228 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 E2F5Q15329 346 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 DNAJC21Q5F1R6 531 aaKnown RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 TSHZ3Q63HK5 1081 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 CLASRPQ8N2M8 674 aaKnown RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 HNRNPLLQ8WVV9 542 aaKnown RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 IPPQ9Y573 584 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 PRPF3O43395 683 aaKnown RBP9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 IFNL2Q8IZJ0 200 aa9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 ENAHQ8N8S7 591 aaPredicted RBP9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 FBXO41Q8TF61 875 aa9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 CFAP53Q96M91 514 aa9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 LEMD3Q9Y2U8 911 aa9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 SETD1BQ9UPS6 1966 aaKnown RBP9.02□□□□□ -0.97
PDGFRA-206ENST00000508170 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 NBNO60934 754 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 RASGRP1O95267 797 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 CD46P15529 392 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 OAS2P29728 719 aaKnown RBP9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 WDR45BQ5MNZ6 344 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 MORC1Q86VD1 984 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 SNX32Q86XE0 403 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 GGT7Q9UJ14 662 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 SNX2O60749 519 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 PMLP29590 882 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 SH3GLB2Q9NR46 395 aa9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.01□□□□□ -0.97
PDGFRA-206ENST00000508170 IGHA2P01877 340 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
PDGFRA-206ENST00000508170 IQCEQ6IPM2 695 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 CATIPQ7Z7H3 387 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 NOB1Q9ULX3 412 aaKnown RBP9□□□□□ -0.97
PDGFRA-206ENST00000508170 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 RASSF10A6NK89 507 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 NDUFB5O43674 189 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 TNFAIP3P21580 790 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 CASQ1P31415 396 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 ATP2B2Q01814 1243 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 ZCCHC8Q6NZY4 707 aaKnown RBP9□□□□□ -0.97
PDGFRA-206ENST00000508170 LVRNQ6Q4G3 990 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 LRP10Q7Z4F1 713 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 MAATS1Q7Z4T9 603 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 DGKHQ86XP1 1220 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 SCLT1Q96NL6 688 aa9□□□□□ -0.97
PDGFRA-206ENST00000508170 IPO8O15397 1037 aaKnown RBP8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 LGR5O75473 907 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 NCAM1P13591 858 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 ADD2P35612 726 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 ZNF132P52740 706 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 ASPSCR1Q9BZE9 553 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 XPO4Q9C0E2 1151 aaKnown RBP8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 RAI14Q9P0K7 980 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 MAFFQ9ULX9 164 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 BICRAQ9NZM4 1560 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 PES1O00541 588 aaKnown RBP8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 ZBTB24O43167 697 aaPredicted RBP8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 SERPINB3P29508 390 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 GNA15P30679 374 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 HTR3AP46098 478 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 MLC1Q15049 377 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 NR6A1Q15406 480 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 ZNF354CQ86Y25 554 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 OR8H2Q8N162 312 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 RPGRQ92834 1020 aaKnown RBP8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 CDH19Q9H159 772 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
PDGFRA-206ENST00000508170 GPR182O15218 404 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 HNRNPCP07910 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 NEK2P51955 445 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 NR1H3Q13133 447 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 JAKMIP3Q5VZ66 844 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 SIX5Q8N196 739 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 STK11IPQ8N1F8 1099 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms