RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 H7C1D1 291 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 TBC1D16Q8TBP0 767 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 ZC3H15Q8WU90 426 aaKnown RBP14.18□□□□□ -0.14
PTPN13-207ENST00000508063 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
PTPN13-207ENST00000508063 SEC31BQ9NQW1 1179 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 ANKIB1Q9P2G1 1089 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
PTPN13-207ENST00000508063 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-207ENST00000508063 YDJCA8MPS7 323 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 CTSWP56202 376 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 DEFB115Q30KQ5 88 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 DPF2Q92785 391 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-207ENST00000508063 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 CNOT7Q9UIV1 285 aaKnown RBP14.17□□□□□ -0.14
PTPN13-207ENST00000508063 GGA1Q9UJY5 639 aa14.17□□□□□ -0.14
PTPN13-207ENST00000508063 ABT1Q9ULW3 272 aaKnown RBP14.17□□□□□ -0.14
PTPN13-207ENST00000508063 RASSF10A6NK89 507 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 NEURL1BA8MQ27 555 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 ECE2O60344 883 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 UFL1O94874 794 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
PTPN13-207ENST00000508063 FLIIQ13045 1269 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
PTPN13-207ENST00000508063 G2E3Q7L622 706 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
PTPN13-207ENST00000508063 XDHP47989 1333 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 MYH3P11055 1940 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 PCNTO95613 3336 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 TRPM7Q96QT4 1865 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 VAMP4O75379 141 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 VEGFBP49765 207 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 CWF19L2Q2TBE0 894 aaKnown RBP14.15□□□□□ -0.14
PTPN13-207ENST00000508063 FAM9BQ8IZU0 186 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
PTPN13-207ENST00000508063 PGAP2Q9UHJ9 254 aa14.15□□□□□ -0.14
PTPN13-207ENST00000508063 COL4A1P02462 1669 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 RTL9Q8NET4 1388 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 H7C1W4 665 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 PSMD14O00487 310 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
PTPN13-207ENST00000508063 CDC37L1Q7L3B6 337 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 TTLL11Q8NHH1 800 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 DNAAF4Q8WXU2 420 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 AIDAQ96BJ3 306 aa14.14□□□□□ -0.15
PTPN13-207ENST00000508063 ECE1P42892 770 aa14.13□□□□□ -0.15
PTPN13-207ENST00000508063 GCKRQ14397 625 aa14.13□□□□□ -0.15
PTPN13-207ENST00000508063 COL13A1Q5TAT6 717 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-207ENST00000508063 UBE3BQ7Z3V4 1068 aa14.13□□□□□ -0.15
PTPN13-207ENST00000508063 BSDC1Q9NW68 430 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-207ENST00000508063 TRAF5O00463 557 aa14.12□□□□□ -0.15
PTPN13-207ENST00000508063 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
PTPN13-207ENST00000508063 IGHMBP2P38935 993 aaKnown RBP14.12□□□□□ -0.15
PTPN13-207ENST00000508063 TRPM4Q8TD43 1214 aa14.12□□□□□ -0.15
PTPN13-207ENST00000508063 GPR101Q96P66 508 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-207ENST00000508063 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
PTPN13-207ENST00000508063 GREM2Q9H772 168 aa14.12□□□□□ -0.15
PTPN13-207ENST00000508063 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
PTPN13-207ENST00000508063 HIRAP54198 1017 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-207ENST00000508063 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-207ENST00000508063 CST9Q5W186 159 aa14.11□□□□□ -0.15
PTPN13-207ENST00000508063 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-207ENST00000508063 TNS4Q8IZW8 715 aa14.11□□□□□ -0.15
PTPN13-207ENST00000508063 GLIS2Q9BZE0 524 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-207ENST00000508063 MINPP1Q9UNW1 487 aa14.11□□□□□ -0.15
PTPN13-207ENST00000508063 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
PTPN13-207ENST00000508063 CELF2O95319 508 aaKnown RBP14.1□□□□□ -0.15
PTPN13-207ENST00000508063 FMR1Q06787 632 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPN13-207ENST00000508063 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-207ENST00000508063 PODNQ7Z5L7 613 aa14.1□□□□□ -0.15
PTPN13-207ENST00000508063 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 CSF1RP07333 972 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 ITGA6P23229 1130 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
PTPN13-207ENST00000508063 RSBN1LQ6PCB5 846 aaPredicted RBP14.09□□□□□ -0.15
PTPN13-207ENST00000508063 SAMD7Q7Z3H4 446 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
PTPN13-207ENST00000508063 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 ANKRD2Q9GZV1 360 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 LEMD3Q9Y2U8 911 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 MED23Q9ULK4 1368 aa14.09□□□□□ -0.15
PTPN13-207ENST00000508063 SPEF2Q9C093 1822 aa14.08□□□□□ -0.15
PTPN13-207ENST00000508063 ZNF609O15014 1411 aa14.08□□□□□ -0.15
PTPN13-207ENST00000508063 USP17L3A6NCW0 530 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 USP17L4A6NCW7 530 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 FOXN1O15353 648 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 CCT4P50991 539 aaKnown RBP14.08□□□□□ -0.16
PTPN13-207ENST00000508063 CASP7P55210 303 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms