RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
HOXC4-203ENST00000507650 GREM2Q9H772 168 aa20.65■□□□□ 0.9
HOXC4-203ENST00000507650 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.9
HOXC4-203ENST00000507650 C6orf229H3BNL8 230 aa20.64■□□□□ 0.89
HOXC4-203ENST00000507650 GCKRQ14397 625 aa20.64■□□□□ 0.89
HOXC4-203ENST00000507650 DOK7Q18PE1 504 aa20.64■□□□□ 0.89
HOXC4-203ENST00000507650 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
HOXC4-203ENST00000507650 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
HOXC4-203ENST00000507650 F6X3S4 739 aa20.63■□□□□ 0.89
HOXC4-203ENST00000507650 PSMD14O00487 310 aa20.63■□□□□ 0.89
HOXC4-203ENST00000507650 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
HOXC4-203ENST00000507650 USP50Q70EL3 339 aaPredicted RBP20.63■□□□□ 0.89
HOXC4-203ENST00000507650 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
HOXC4-203ENST00000507650 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
HOXC4-203ENST00000507650 TMEM88BA6NKF7 163 aa20.62■□□□□ 0.89
HOXC4-203ENST00000507650 TRAF5O00463 557 aa20.62■□□□□ 0.89
HOXC4-203ENST00000507650 ECE2O60344 883 aa20.62■□□□□ 0.89
HOXC4-203ENST00000507650 EGFRP00533 1210 aa20.62■□□□□ 0.89
HOXC4-203ENST00000507650 NEXNQ0ZGT2 675 aa20.62■□□□□ 0.89
HOXC4-203ENST00000507650 UFL1O94874 794 aa20.61■□□□□ 0.89
HOXC4-203ENST00000507650 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
HOXC4-203ENST00000507650 TNIP1Q15025 636 aa20.6■□□□□ 0.89
HOXC4-203ENST00000507650 ANKRD18AQ8IVF6 992 aa20.6■□□□□ 0.89
HOXC4-203ENST00000507650 LINS1Q8NG48 757 aa20.6■□□□□ 0.89
HOXC4-203ENST00000507650 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
HOXC4-203ENST00000507650 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
HOXC4-203ENST00000507650 HSPA1AP0DMV8 641 aaKnown RBP20.59■□□□□ 0.89
HOXC4-203ENST00000507650 HSPA1BP0DMV9 641 aaKnown RBP20.59■□□□□ 0.89
HOXC4-203ENST00000507650 BEND3Q5T5X7 828 aa20.59■□□□□ 0.89
HOXC4-203ENST00000507650 CST9Q5W186 159 aa20.59■□□□□ 0.89
HOXC4-203ENST00000507650 MICALL2Q8IY33 904 aa20.59■□□□□ 0.89
HOXC4-203ENST00000507650 CNOT7Q9UIV1 285 aaKnown RBP20.59■□□□□ 0.89
HOXC4-203ENST00000507650 GGA1Q9UJY5 639 aa20.59■□□□□ 0.89
HOXC4-203ENST00000507650 VEGFBP49765 207 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 EYA3Q99504 573 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 ANKIB1Q9P2G1 1089 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 MINPP1Q9UNW1 487 aa20.58■□□□□ 0.89
HOXC4-203ENST00000507650 XDHP47989 1333 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 ZNF609O15014 1411 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 CSF1RP07333 972 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
HOXC4-203ENST00000507650 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 DLK2Q6UY11 383 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
HOXC4-203ENST00000507650 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
HOXC4-203ENST00000507650 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
HOXC4-203ENST00000507650 RASSF10A6NK89 507 aa20.56■□□□□ 0.88
HOXC4-203ENST00000507650 FOXO4P98177 505 aa20.56■□□□□ 0.88
HOXC4-203ENST00000507650 DPF2Q92785 391 aa20.56■□□□□ 0.88
HOXC4-203ENST00000507650 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
HOXC4-203ENST00000507650 VIL1P09327 827 aaKnown RBP20.55■□□□□ 0.88
HOXC4-203ENST00000507650 EPHA10Q5JZY3 1008 aa20.55■□□□□ 0.88
HOXC4-203ENST00000507650 TXNRD3Q86VQ6 643 aa20.55■□□□□ 0.88
HOXC4-203ENST00000507650 ZC3H12CQ9C0D7 883 aaKnown RBP20.55■□□□□ 0.88
HOXC4-203ENST00000507650 ITGA6P23229 1130 aa20.54■□□□□ 0.88
HOXC4-203ENST00000507650 KLRK1P26718 216 aa20.54■□□□□ 0.88
HOXC4-203ENST00000507650 MED23Q9ULK4 1368 aa20.54■□□□□ 0.88
HOXC4-203ENST00000507650 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
HOXC4-203ENST00000507650 TBC1D10BQ4KMP7 808 aaPredicted RBP20.53■□□□□ 0.88
HOXC4-203ENST00000507650 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
HOXC4-203ENST00000507650 GMLQ99445 158 aa20.52■□□□□ 0.88
HOXC4-203ENST00000507650 IRS2Q9Y4H2 1338 aa20.52■□□□□ 0.87
HOXC4-203ENST00000507650 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
HOXC4-203ENST00000507650 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
HOXC4-203ENST00000507650 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
HOXC4-203ENST00000507650 CDCA7LQ96GN5 454 aa20.51■□□□□ 0.87
HOXC4-203ENST00000507650 H7C1D1 291 aa20.5■□□□□ 0.87
HOXC4-203ENST00000507650 SNAP23O00161 211 aa20.5■□□□□ 0.87
HOXC4-203ENST00000507650 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
HOXC4-203ENST00000507650 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
HOXC4-203ENST00000507650 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
HOXC4-203ENST00000507650 KAZALD1Q96I82 304 aa20.5■□□□□ 0.87
HOXC4-203ENST00000507650 ABT1Q9ULW3 272 aaKnown RBP20.5■□□□□ 0.87
HOXC4-203ENST00000507650 FOXN1O15353 648 aa20.49■□□□□ 0.87
HOXC4-203ENST00000507650 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
HOXC4-203ENST00000507650 MXD3Q9BW11 206 aa20.49■□□□□ 0.87
HOXC4-203ENST00000507650 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
HOXC4-203ENST00000507650 GRM8O00222 908 aa20.48■□□□□ 0.87
HOXC4-203ENST00000507650 ZNF280AP59817 542 aaPredicted RBP20.48■□□□□ 0.87
HOXC4-203ENST00000507650 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
HOXC4-203ENST00000507650 WDR33Q9C0J8 1336 aaKnown RBP20.48■□□□□ 0.87
HOXC4-203ENST00000507650 ADM5C9JUS6 153 aa20.47■□□□□ 0.87
HOXC4-203ENST00000507650 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
HOXC4-203ENST00000507650 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
HOXC4-203ENST00000507650 CHRNDQ07001 517 aa20.47■□□□□ 0.87
HOXC4-203ENST00000507650 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
HOXC4-203ENST00000507650 RBM26Q5T8P6 1007 aaKnown RBP20.47■□□□□ 0.87
HOXC4-203ENST00000507650 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
HOXC4-203ENST00000507650 ECM29Q5VYK3 1845 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 E9PSI1 815 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 DACT2Q5SW24 774 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 SLC4A10Q6U841 1118 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 CDC37L1Q7L3B6 337 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 SAPCD2Q86UD0 394 aa20.46■□□□□ 0.87
HOXC4-203ENST00000507650 TRMT2AQ8IZ69 625 aaKnown RBP20.46■□□□□ 0.87
HOXC4-203ENST00000507650 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms