RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 XAGE3Q8WTP9 111 aa18.29■□□□□ 0.52
DDR1-260ENST00000507533 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
DDR1-260ENST00000507533 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
DDR1-260ENST00000507533 POLR2AP24928 1970 aaKnown RBP18.29■□□□□ 0.52
DDR1-260ENST00000507533 LAMB2P55268 1798 aa18.29■□□□□ 0.52
DDR1-260ENST00000507533 GPR25O00155 361 aa18.28■□□□□ 0.52
DDR1-260ENST00000507533 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
DDR1-260ENST00000507533 MOB2Q70IA6 237 aa18.28■□□□□ 0.52
DDR1-260ENST00000507533 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
DDR1-260ENST00000507533 TBC1D16Q8TBP0 767 aa18.27■□□□□ 0.52
DDR1-260ENST00000507533 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
DDR1-260ENST00000507533 G3V3G9 751 aa18.26■□□□□ 0.51
DDR1-260ENST00000507533 TM4SF4P48230 202 aa18.26■□□□□ 0.51
DDR1-260ENST00000507533 ZNF280AP59817 542 aaPredicted RBP18.26■□□□□ 0.51
DDR1-260ENST00000507533 SF3B3Q15393 1217 aaKnown RBP18.26■□□□□ 0.51
DDR1-260ENST00000507533 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
DDR1-260ENST00000507533 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
DDR1-260ENST00000507533 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
DDR1-260ENST00000507533 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
DDR1-260ENST00000507533 TAF1P21675 1872 aa18.25■□□□□ 0.51
DDR1-260ENST00000507533 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
DDR1-260ENST00000507533 FKTNO75072 461 aa18.24■□□□□ 0.51
DDR1-260ENST00000507533 RSBN1LQ6PCB5 846 aaPredicted RBP18.24■□□□□ 0.51
DDR1-260ENST00000507533 AGBL3Q8NEM8 1001 aa18.24■□□□□ 0.51
DDR1-260ENST00000507533 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
DDR1-260ENST00000507533 SCAF8Q9UPN6 1271 aaKnown RBP18.24■□□□□ 0.51
DDR1-260ENST00000507533 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
DDR1-260ENST00000507533 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
DDR1-260ENST00000507533 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
DDR1-260ENST00000507533 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
DDR1-260ENST00000507533 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
DDR1-260ENST00000507533 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
DDR1-260ENST00000507533 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
DDR1-260ENST00000507533 UFL1O94874 794 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 USP17L8P0C7I0 530 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 SREBF2Q12772 1141 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.51
DDR1-260ENST00000507533 DLG5Q8TDM6 1919 aa18.2■□□□□ 0.5
DDR1-260ENST00000507533 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
DDR1-260ENST00000507533 GMLQ99445 158 aa18.2■□□□□ 0.5
DDR1-260ENST00000507533 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
DDR1-260ENST00000507533 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
DDR1-260ENST00000507533 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
DDR1-260ENST00000507533 POTEFA5A3E0 1075 aa18.19■□□□□ 0.5
DDR1-260ENST00000507533 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
DDR1-260ENST00000507533 ZNF609O15014 1411 aa18.19■□□□□ 0.5
DDR1-260ENST00000507533 ISCA1Q9BUE6 129 aa18.19■□□□□ 0.5
DDR1-260ENST00000507533 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
DDR1-260ENST00000507533 COL4A1P02462 1669 aa18.18■□□□□ 0.5
DDR1-260ENST00000507533 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
DDR1-260ENST00000507533 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
DDR1-260ENST00000507533 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
DDR1-260ENST00000507533 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
DDR1-260ENST00000507533 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
DDR1-260ENST00000507533 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 NF2P35240 595 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
DDR1-260ENST00000507533 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 SEC31BQ9NQW1 1179 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 TRIM17Q9Y577 477 aa18.17■□□□□ 0.5
DDR1-260ENST00000507533 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
DDR1-260ENST00000507533 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
DDR1-260ENST00000507533 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
DDR1-260ENST00000507533 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
DDR1-260ENST00000507533 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
DDR1-260ENST00000507533 MKI67P46013 3256 aaKnown RBP18.15■□□□□ 0.5
DDR1-260ENST00000507533 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
DDR1-260ENST00000507533 RIPK4P57078 832 aa18.15■□□□□ 0.5
DDR1-260ENST00000507533 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
DDR1-260ENST00000507533 PRKG1Q13976 671 aa18.14■□□□□ 0.49
DDR1-260ENST00000507533 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
DDR1-260ENST00000507533 PODNQ7Z5L7 613 aa18.14■□□□□ 0.49
DDR1-260ENST00000507533 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
DDR1-260ENST00000507533 SPRYD7Q5W111 196 aa18.13■□□□□ 0.49
DDR1-260ENST00000507533 WNT10BO00744 389 aa18.12■□□□□ 0.49
DDR1-260ENST00000507533 TRIM28Q13263 835 aaKnown RBP18.12■□□□□ 0.49
DDR1-260ENST00000507533 OGFOD1Q8N543 542 aa18.12■□□□□ 0.49
DDR1-260ENST00000507533 HTTP42858 3142 aa18.12■□□□□ 0.49
DDR1-260ENST00000507533 EN2P19622 333 aaPredicted RBP18.11■□□□□ 0.49
DDR1-260ENST00000507533 INHBEP58166 350 aa18.11■□□□□ 0.49
DDR1-260ENST00000507533 LDLRAD1Q5T700 205 aa18.11■□□□□ 0.49
DDR1-260ENST00000507533 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
DDR1-260ENST00000507533 MXD3Q9BW11 206 aa18.11■□□□□ 0.49
DDR1-260ENST00000507533 XDHP47989 1333 aa18.11■□□□□ 0.49
DDR1-260ENST00000507533 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
DDR1-260ENST00000507533 CCDC152Q4G0S7 254 aa18.1■□□□□ 0.49
DDR1-260ENST00000507533 IFNL1Q8IU54 200 aa18.1■□□□□ 0.49
DDR1-260ENST00000507533 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
DDR1-260ENST00000507533 PTPN22Q9Y2R2 807 aa18.1■□□□□ 0.49
DDR1-260ENST00000507533 SASH1O94885 1247 aa18.09■□□□□ 0.49
DDR1-260ENST00000507533 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
DDR1-260ENST00000507533 DACT2Q5SW24 774 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms