RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 ZBTB40Q9NUA8 1239 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 POGKQ9P215 609 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 PPIP5K1Q6PFW1 1433 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 ADGRB1O14514 1584 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 IBTKQ9P2D0 1353 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-213ENST00000506927 GLI2P10070 1586 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 FRMPD1Q5SYB0 1578 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 POGZQ7Z3K3 1410 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 H3BM21 787 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 U2SURPO15042 1029 aaKnown RBP7.22□□□□□ -1.25
CLDND1-213ENST00000506927 ATP9BO43861 1147 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 PPFIA3O75145 1194 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 RHOQP17081 205 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 MFAP1P55081 439 aaKnown RBP7.22□□□□□ -1.25
CLDND1-213ENST00000506927 RIPK4P57078 832 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 CENPCQ03188 943 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 EXOSC9Q06265 439 aaKnown RBP7.22□□□□□ -1.25
CLDND1-213ENST00000506927 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 CHD1LQ86WJ1 897 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 NOD1Q9Y239 953 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
CLDND1-213ENST00000506927 UGGT1Q9NYU2 1555 aa7.21□□□□□ -1.25
CLDND1-213ENST00000506927 NPATQ14207 1427 aa7.21□□□□□ -1.25
CLDND1-213ENST00000506927 CD109Q6YHK3 1445 aa7.21□□□□□ -1.25
CLDND1-213ENST00000506927 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 USP17L3A6NCW0 530 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 USP17L4A6NCW7 530 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 TRIM27P14373 513 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 MCM2P49736 904 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 SCNN1DP51172 638 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 CCDC173Q0VFZ6 552 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 RABEP1Q15276 862 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 HS1BP3Q53T59 392 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 ESCO1Q5FWF5 840 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 USP17L2Q6R6M4 530 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 CLEC17AQ6ZS10 378 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 USP17L1Q7RTZ2 530 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 CCDC155Q8N6L0 562 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 GRPEL1Q9HAV7 217 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 IFT57Q9NWB7 429 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
CLDND1-213ENST00000506927 NOB1Q9ULX3 412 aaKnown RBP7.21□□□□□ -1.26
CLDND1-213ENST00000506927 NLRP1Q9C000 1473 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 MROH2AA6NES4 1674 aa7.21□□□□□ -1.26
CLDND1-213ENST00000506927 PNPLA6Q8IY17 1366 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 PIK3C2BO00750 1634 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 CAMSAP1Q5T5Y3 1602 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 CLTCQ00610 1675 aaKnown RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 RRP9O43818 475 aaKnown RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 CDC45O75419 566 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 INHAP05111 366 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 TPM2P07951 284 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 TNNT2P45379 298 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 TERF1P54274 439 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 GDF10P55107 478 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 GTF2IP78347 998 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 POU4F2Q12837 409 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 INTS3Q68E01 1043 aaKnown RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 PLEKHM2Q8IWE5 1019 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 UBE2Q2Q8WVN8 375 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 SSH1Q8WYL5 1049 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 PLEKHF1Q96S99 279 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 RRP7AQ9Y3A4 280 aaKnown RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 ARHGEF28Q8N1W1 1705 aaKnown RBP7.2□□□□□ -1.26
CLDND1-213ENST00000506927 ABCC3O15438 1527 aa7.2□□□□□ -1.26
CLDND1-213ENST00000506927 NCOA3Q9Y6Q9 1424 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 ATP7BP35670 1465 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 PALM3A6NDB9 673 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 K7ELQ4 463 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 HMMRO75330 724 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 REC8O95072 547 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 RLBP1P12271 317 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 RAB3GAP1Q15042 981 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 NFE2L2Q16236 605 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 GGT6Q6P531 493 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 MTERF4Q7Z6M4 381 aaKnown RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 RPAP2Q8IXW5 612 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 ZSCAN10Q96SZ4 725 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 MAP7D2Q96T17 732 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 PPP1R12CQ9BZL4 782 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-213ENST00000506927 ERCC6L2Q5T890 1561 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 ERBB4Q15303 1308 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 PIK3R4Q99570 1358 aa7.19□□□□□ -1.26
CLDND1-213ENST00000506927 TMEM229AB2RXF0 380 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 EPB41L2O43491 1005 aaKnown RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 XRCC6P12956 609 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 PDIA4P13667 645 aaKnown RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 MCCP23508 829 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 MCM5P33992 734 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 PSME1Q06323 249 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 ANKRD45Q5TZF3 282 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 NBPF10Q6P3W6 841 aaKnown RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 SKAP1Q86WV1 359 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 TMEM57Q8N5G2 664 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 NBPF15Q8N660 670 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms