RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MLLT1Q03111 559 aaPredicted RBP9.75□□□□□ -0.85
HERC4-213ENST00000506515 HYAL2Q12891 473 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 GAS6Q14393 721 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 ZNF468Q5VIY5 522 aaPredicted RBP9.75□□□□□ -0.85
HERC4-213ENST00000506515 FRMD6Q96NE9 622 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 UBE2OQ9C0C9 1292 aaKnown RBP9.75□□□□□ -0.85
HERC4-213ENST00000506515 AK5Q9Y6K8 562 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
HERC4-213ENST00000506515 EIF4BP23588 611 aaKnown RBP9.74□□□□□ -0.85
HERC4-213ENST00000506515 ITGAEP38570 1179 aa9.74□□□□□ -0.85
HERC4-213ENST00000506515 HFE2Q6ZVN8 426 aa9.74□□□□□ -0.85
HERC4-213ENST00000506515 NPAS3Q8IXF0 933 aa9.74□□□□□ -0.85
HERC4-213ENST00000506515 OSBPL7Q9BZF2 842 aa9.74□□□□□ -0.85
HERC4-213ENST00000506515 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
HERC4-213ENST00000506515 NRLP54845 237 aa9.73□□□□□ -0.85
HERC4-213ENST00000506515 PEAR1Q5VY43 1037 aaPredicted RBP9.73□□□□□ -0.85
HERC4-213ENST00000506515 NXPE4Q6UWF7 544 aa9.73□□□□□ -0.85
HERC4-213ENST00000506515 BCO2Q9BYV7 579 aa9.73□□□□□ -0.85
HERC4-213ENST00000506515 EHD4Q9H223 541 aa9.73□□□□□ -0.85
HERC4-213ENST00000506515 DNAJB12Q9NXW2 375 aaKnown RBP9.73□□□□□ -0.85
HERC4-213ENST00000506515 A0A1W2PP55 124 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 J3QW42 95 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 KIF4AO95239 1232 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 ACPPP15309 386 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 C12orf49Q9H741 205 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
HERC4-213ENST00000506515 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
HERC4-213ENST00000506515 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 TERTO14746 1132 aaKnown RBP9.71□□□□□ -0.86
HERC4-213ENST00000506515 GIPC1O14908 333 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 SIN3BO75182 1162 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 TRPA1O75762 1119 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 SIK1P57059 783 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 GPLD1P80108 840 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 GRM2Q14416 872 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 TRPM4Q8TD43 1214 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 COL25A1Q9BXS0 654 aaPredicted RBP9.71□□□□□ -0.86
HERC4-213ENST00000506515 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.86
HERC4-213ENST00000506515 HOXD8P13378 290 aaPredicted RBP9.7□□□□□ -0.86
HERC4-213ENST00000506515 TCF3P15923 654 aa9.7□□□□□ -0.86
HERC4-213ENST00000506515 SLC16A10Q8TF71 515 aa9.7□□□□□ -0.86
HERC4-213ENST00000506515 OSMRQ99650 979 aa9.7□□□□□ -0.86
HERC4-213ENST00000506515 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
HERC4-213ENST00000506515 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
HERC4-213ENST00000506515 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 ARAFP10398 606 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 ADH6P28332 368 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 LDLRAD1Q5T700 205 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 CEP120Q8N960 986 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
HERC4-213ENST00000506515 AVENQ9NQS1 362 aaPredicted RBP9.69□□□□□ -0.86
HERC4-213ENST00000506515 IGF1RP08069 1367 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 GHRHP01286 108 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 CTSHP09668 335 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 USP17L7P0C7H9 530 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 VSIG8P0DPA2 414 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 CPB1P15086 417 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 EIF2AK2P19525 551 aaKnown RBP9.68□□□□□ -0.86
HERC4-213ENST00000506515 MAP2K3P46734 347 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 PCSK7Q16549 785 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 CNTNAP3Q9BZ76 1288 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 IGSF5Q9NSI5 407 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 PPP4R2Q9NY27 417 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 FAM8A1Q9UBU6 413 aa9.68□□□□□ -0.86
HERC4-213ENST00000506515 ATP11AP98196 1134 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 FAM35AQ86V20 835 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 TNFRSF25Q93038 417 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 HHIPQ96QV1 700 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 SRCIN1Q9C0H9 1055 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 RASSF4Q9H2L5 321 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 DZANK1Q9NVP4 752 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 GGA1Q9UJY5 639 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 TRAK1Q9UPV9 953 aa9.67□□□□□ -0.86
HERC4-213ENST00000506515 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
HERC4-213ENST00000506515 ADH7P40394 386 aa9.66□□□□□ -0.86
HERC4-213ENST00000506515 FCGRTP55899 365 aa9.66□□□□□ -0.86
HERC4-213ENST00000506515 FCHSD1Q86WN1 690 aa9.66□□□□□ -0.86
HERC4-213ENST00000506515 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
HERC4-213ENST00000506515 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
HERC4-213ENST00000506515 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.86
HERC4-213ENST00000506515 MICALL1Q8N3F8 863 aa9.65□□□□□ -0.86
HERC4-213ENST00000506515 IRF7Q92985 503 aa9.65□□□□□ -0.86
HERC4-213ENST00000506515 TCF12Q99081 682 aa9.65□□□□□ -0.86
HERC4-213ENST00000506515 NFKBIEO00221 500 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 GSTT1P30711 240 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 MEI1Q5TIA1 1274 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 C9orf131Q5VYM1 1079 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 CEP135Q66GS9 1140 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 CCNJLQ8IV13 435 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 ASAP3Q8TDY4 903 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 OXCT2Q9BYC2 517 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms