RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 MPNDQ8N594 471 aa11.88□□□□□ -0.51
COPS4-204ENST00000506443 SAGE1Q9NXZ1 904 aa11.88□□□□□ -0.51
COPS4-204ENST00000506443 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 SLC10A5Q5PT55 438 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
COPS4-204ENST00000506443 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
COPS4-204ENST00000506443 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
COPS4-204ENST00000506443 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
COPS4-204ENST00000506443 CELF1Q92879 486 aaKnown RBP11.86□□□□□ -0.51
COPS4-204ENST00000506443 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
COPS4-204ENST00000506443 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
COPS4-204ENST00000506443 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
COPS4-204ENST00000506443 BRCA2P51587 3418 aa11.86□□□□□ -0.51
COPS4-204ENST00000506443 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
COPS4-204ENST00000506443 ECE2O60344 883 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 GPSM2P81274 684 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 SP8Q8IXZ3 490 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
COPS4-204ENST00000506443 PLEKHF1Q96S99 279 aa11.85□□□□□ -0.51
COPS4-204ENST00000506443 H7C1D1 291 aa11.84□□□□□ -0.51
COPS4-204ENST00000506443 GRAPQ13588 217 aa11.84□□□□□ -0.51
COPS4-204ENST00000506443 TNIP1Q15025 636 aa11.84□□□□□ -0.51
COPS4-204ENST00000506443 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
COPS4-204ENST00000506443 SUPT20HQ8NEM7 779 aa11.84□□□□□ -0.51
COPS4-204ENST00000506443 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
COPS4-204ENST00000506443 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
COPS4-204ENST00000506443 BBOX1O75936 387 aa11.83□□□□□ -0.52
COPS4-204ENST00000506443 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
COPS4-204ENST00000506443 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
COPS4-204ENST00000506443 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
COPS4-204ENST00000506443 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
COPS4-204ENST00000506443 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
COPS4-204ENST00000506443 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
COPS4-204ENST00000506443 CENPFP49454 3210 aa11.83□□□□□ -0.52
COPS4-204ENST00000506443 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
COPS4-204ENST00000506443 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
COPS4-204ENST00000506443 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
COPS4-204ENST00000506443 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
COPS4-204ENST00000506443 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
COPS4-204ENST00000506443 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
COPS4-204ENST00000506443 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
COPS4-204ENST00000506443 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
COPS4-204ENST00000506443 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
COPS4-204ENST00000506443 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
COPS4-204ENST00000506443 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 CAP1Q01518 475 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
COPS4-204ENST00000506443 DPF2Q92785 391 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
COPS4-204ENST00000506443 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
COPS4-204ENST00000506443 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
COPS4-204ENST00000506443 TRIOBPQ9H2D6 2365 aa11.81□□□□□ -0.52
COPS4-204ENST00000506443 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
COPS4-204ENST00000506443 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
COPS4-204ENST00000506443 COPS6Q7L5N1 327 aa11.8□□□□□ -0.52
COPS4-204ENST00000506443 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
COPS4-204ENST00000506443 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
COPS4-204ENST00000506443 SCARF1Q14162 830 aa11.79□□□□□ -0.52
COPS4-204ENST00000506443 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
COPS4-204ENST00000506443 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
COPS4-204ENST00000506443 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
COPS4-204ENST00000506443 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
COPS4-204ENST00000506443 CEP290O15078 2479 aa11.78□□□□□ -0.52
COPS4-204ENST00000506443 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
COPS4-204ENST00000506443 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
COPS4-204ENST00000506443 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
COPS4-204ENST00000506443 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
COPS4-204ENST00000506443 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
COPS4-204ENST00000506443 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
COPS4-204ENST00000506443 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
COPS4-204ENST00000506443 SZT2Q5T011 3432 aa11.77□□□□□ -0.52
COPS4-204ENST00000506443 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
COPS4-204ENST00000506443 GPR25O00155 361 aa11.77□□□□□ -0.53
COPS4-204ENST00000506443 PRKG1Q13976 671 aa11.77□□□□□ -0.53
COPS4-204ENST00000506443 JARID2Q92833 1246 aaPredicted RBP11.77□□□□□ -0.53
COPS4-204ENST00000506443 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
COPS4-204ENST00000506443 LAMB1P07942 1786 aa11.77□□□□□ -0.53
COPS4-204ENST00000506443 UFL1O94874 794 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 SASH1O94885 1247 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
COPS4-204ENST00000506443 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
COPS4-204ENST00000506443 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
COPS4-204ENST00000506443 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
COPS4-204ENST00000506443 GMLQ99445 158 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
COPS4-204ENST00000506443 NEFMP07197 916 aa11.75□□□□□ -0.53
COPS4-204ENST00000506443 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
COPS4-204ENST00000506443 ZNF609O15014 1411 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms