RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 PGAP2Q9UHJ9 254 aa18.45■□□□□ 0.54
CDC42SE2-209ENST00000506419 CNTNAP1P78357 1384 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 HSPA1AP0DMV8 641 aaKnown RBP18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 HSPA1BP0DMV9 641 aaKnown RBP18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 VEGFBP49765 207 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 CASP7P55210 303 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 CTSWP56202 376 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 GCKRQ14397 625 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 CST9Q5W186 159 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 GREM2Q9H772 168 aa18.44■□□□□ 0.54
CDC42SE2-209ENST00000506419 ECE2O60344 883 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 ANKRD18AQ8IVF6 992 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 TRPM4Q8TD43 1214 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 DNAAF4Q8WXU2 420 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 EYA3Q99504 573 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 ZC3H12CQ9C0D7 883 aaKnown RBP18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 ANKIB1Q9P2G1 1089 aa18.43■□□□□ 0.54
CDC42SE2-209ENST00000506419 UFL1O94874 794 aa18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 UBE3BQ7Z3V4 1068 aa18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 DPF2Q92785 391 aa18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
CDC42SE2-209ENST00000506419 DEFB115Q30KQ5 88 aa18.41■□□□□ 0.54
CDC42SE2-209ENST00000506419 MICALL2Q8IY33 904 aa18.41■□□□□ 0.54
CDC42SE2-209ENST00000506419 MINPP1Q9UNW1 487 aa18.41■□□□□ 0.54
CDC42SE2-209ENST00000506419 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 RASSF10A6NK89 507 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 F6X3S4 739 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 H7C1D1 291 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 EGFRP00533 1210 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 CSF1RP07333 972 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 VIL1P09327 827 aaKnown RBP18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 LINS1Q8NG48 757 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
CDC42SE2-209ENST00000506419 DLK2Q6UY11 383 aa18.39■□□□□ 0.53
CDC42SE2-209ENST00000506419 ZC3H15Q8WU90 426 aaKnown RBP18.39■□□□□ 0.53
CDC42SE2-209ENST00000506419 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.53
CDC42SE2-209ENST00000506419 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
CDC42SE2-209ENST00000506419 BEND3Q5T5X7 828 aa18.38■□□□□ 0.53
CDC42SE2-209ENST00000506419 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
CDC42SE2-209ENST00000506419 ABT1Q9ULW3 272 aaKnown RBP18.38■□□□□ 0.53
CDC42SE2-209ENST00000506419 XDHP47989 1333 aa18.38■□□□□ 0.53
CDC42SE2-209ENST00000506419 TBC1D10BQ4KMP7 808 aaPredicted RBP18.37■□□□□ 0.53
CDC42SE2-209ENST00000506419 RBM26Q5T8P6 1007 aaKnown RBP18.37■□□□□ 0.53
CDC42SE2-209ENST00000506419 RPS12P25398 132 aaKnown RBP18.36■□□□□ 0.53
CDC42SE2-209ENST00000506419 FOXO4P98177 505 aa18.36■□□□□ 0.53
CDC42SE2-209ENST00000506419 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
CDC42SE2-209ENST00000506419 WDR33Q9C0J8 1336 aaKnown RBP18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 G3V3G9 751 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 ITGA6P23229 1130 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 TXNRD3Q86VQ6 643 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 WBP1LQ9NX94 342 aa18.35■□□□□ 0.53
CDC42SE2-209ENST00000506419 FOXN1O15353 648 aa18.34■□□□□ 0.53
CDC42SE2-209ENST00000506419 CELF2O95319 508 aaKnown RBP18.34■□□□□ 0.53
CDC42SE2-209ENST00000506419 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
CDC42SE2-209ENST00000506419 GMLQ99445 158 aa18.34■□□□□ 0.53
CDC42SE2-209ENST00000506419 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
CDC42SE2-209ENST00000506419 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
CDC42SE2-209ENST00000506419 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
CDC42SE2-209ENST00000506419 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.52
CDC42SE2-209ENST00000506419 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
CDC42SE2-209ENST00000506419 PODNQ7Z5L7 613 aa18.33■□□□□ 0.52
CDC42SE2-209ENST00000506419 ASTN2O75129 1339 aaPredicted RBP18.32■□□□□ 0.52
CDC42SE2-209ENST00000506419 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
CDC42SE2-209ENST00000506419 SAPCD2Q86UD0 394 aa18.32■□□□□ 0.52
CDC42SE2-209ENST00000506419 CAPNS2Q96L46 248 aa18.32■□□□□ 0.52
CDC42SE2-209ENST00000506419 USP17L3A6NCW0 530 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 USP17L4A6NCW7 530 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 SNAP23O00161 211 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 KLRK1P26718 216 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 USP17L1Q7RTZ2 530 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 MRPL50Q8N5N7 158 aaKnown RBP18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 AGBL3Q8NEM8 1001 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
CDC42SE2-209ENST00000506419 MPHOSPH8Q99549 860 aa18.3■□□□□ 0.52
CDC42SE2-209ENST00000506419 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
CDC42SE2-209ENST00000506419 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
CDC42SE2-209ENST00000506419 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 ADM5C9JUS6 153 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 GRM8O00222 908 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 CHRNDQ07001 517 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 KRT26Q7Z3Y9 468 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 ANKRD2Q9GZV1 360 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
CDC42SE2-209ENST00000506419 AOC2O75106 756 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 TAF5LO75529 589 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms