RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 GBA2Q9HCG7 927 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 KCNQ5Q9NR82 932 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 UFL1O94874 794 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 DDX10Q13206 875 aaKnown RBP10.71□□□□□ -0.69
SNF8-204ENST00000506104 NOGQ13253 232 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 RALBP1Q15311 655 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 KIF4BQ2VIQ3 1234 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 RGMBQ6NW40 437 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 SULF1Q8IWU6 871 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 BABAM1Q9NWV8 329 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
SNF8-204ENST00000506104 POLLQ9UGP5 575 aa10.71□□□□□ -0.69
SNF8-204ENST00000506104 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 DUOX1Q9NRD9 1551 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 TRPA1O75762 1119 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 EGFRP00533 1210 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 RPS8P62241 208 aaKnown RBP10.7□□□□□ -0.7
SNF8-204ENST00000506104 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
SNF8-204ENST00000506104 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
SNF8-204ENST00000506104 DUSP27Q5VZP5 1158 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 MYD88Q99836 296 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 PGAP2Q9UHJ9 254 aa10.7□□□□□ -0.7
SNF8-204ENST00000506104 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 CHL1O00533 1208 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 SOX10P56693 466 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 DPF2Q92785 391 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 RUNDC1Q96C34 613 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 HHIPL1Q96JK4 782 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
SNF8-204ENST00000506104 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
SNF8-204ENST00000506104 ASTN2O75129 1339 aaPredicted RBP10.68□□□□□ -0.7
SNF8-204ENST00000506104 RPS12P25398 132 aaKnown RBP10.68□□□□□ -0.7
SNF8-204ENST00000506104 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
SNF8-204ENST00000506104 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
SNF8-204ENST00000506104 COL4A1P02462 1669 aa10.68□□□□□ -0.7
SNF8-204ENST00000506104 RTL9Q8NET4 1388 aa10.67□□□□□ -0.7
SNF8-204ENST00000506104 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
SNF8-204ENST00000506104 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
SNF8-204ENST00000506104 SCARF1Q14162 830 aa10.67□□□□□ -0.7
SNF8-204ENST00000506104 SF3B3Q15393 1217 aaKnown RBP10.67□□□□□ -0.7
SNF8-204ENST00000506104 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
SNF8-204ENST00000506104 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
SNF8-204ENST00000506104 PHAXQ9H814 394 aaKnown RBP10.67□□□□□ -0.7
SNF8-204ENST00000506104 MBIPQ9NS73 344 aa10.67□□□□□ -0.7
SNF8-204ENST00000506104 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
SNF8-204ENST00000506104 HSP90B1P14625 803 aaKnown RBP10.66□□□□□ -0.7
SNF8-204ENST00000506104 CCDC152Q4G0S7 254 aa10.66□□□□□ -0.7
SNF8-204ENST00000506104 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
SNF8-204ENST00000506104 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
SNF8-204ENST00000506104 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
SNF8-204ENST00000506104 MYH3P11055 1940 aa10.65□□□□□ -0.7
SNF8-204ENST00000506104 PRKG1Q13976 671 aa10.65□□□□□ -0.7
SNF8-204ENST00000506104 PRAMEF18Q5VWM3 479 aa10.65□□□□□ -0.7
SNF8-204ENST00000506104 MOB2Q70IA6 237 aa10.65□□□□□ -0.7
SNF8-204ENST00000506104 ZBTB38Q8NAP3 1195 aaPredicted RBP10.65□□□□□ -0.7
SNF8-204ENST00000506104 CWC25Q9NXE8 425 aaPredicted RBP10.65□□□□□ -0.7
SNF8-204ENST00000506104 HDAC9Q9UKV0 1011 aa10.65□□□□□ -0.7
SNF8-204ENST00000506104 FAM155AB1AL88 458 aaPredicted RBP10.64□□□□□ -0.71
SNF8-204ENST00000506104 UBE2Q2LH0YL09 131 aa10.64□□□□□ -0.71
SNF8-204ENST00000506104 PDE8AO60658 829 aa10.64□□□□□ -0.71
SNF8-204ENST00000506104 DDX58O95786 925 aaKnown RBP10.64□□□□□ -0.71
SNF8-204ENST00000506104 VIL1P09327 827 aaKnown RBP10.64□□□□□ -0.71
SNF8-204ENST00000506104 HOXB7P09629 217 aa10.64□□□□□ -0.71
SNF8-204ENST00000506104 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
SNF8-204ENST00000506104 RSBN1LQ6PCB5 846 aaPredicted RBP10.64□□□□□ -0.71
SNF8-204ENST00000506104 PSME4Q14997 1843 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 APAF1O14727 1248 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 SLC34A2O95436 690 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 SLC10A3P09131 477 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 ATP2B4P23634 1241 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 RGS19P49795 217 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 MYOZ2Q9NPC6 264 aa10.63□□□□□ -0.71
SNF8-204ENST00000506104 XDHP47989 1333 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 TBC1D8O95759 1140 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
SNF8-204ENST00000506104 NF2P35240 595 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 GNAI1P63096 354 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 CTU1Q7Z7A3 348 aaKnown RBP10.62□□□□□ -0.71
SNF8-204ENST00000506104 RASAL3Q86YV0 1011 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 CCDC191Q8NCU4 936 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 AGBL3Q8NEM8 1001 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 CDC5LQ99459 802 aaKnown RBP10.62□□□□□ -0.71
SNF8-204ENST00000506104 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
SNF8-204ENST00000506104 SASH1O94885 1247 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 KCNJ4P48050 445 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 CALD1Q05682 793 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms