RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 INPP5BP32019 993 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 IGF2-ASQ6U949 168 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 DHX32Q7L7V1 743 aaKnown RBP9.98□□□□□ -0.81
CHD1-204ENST00000505982 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 TTC9Q92623 222 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 EGFL7Q9UHF1 273 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 AMOTL2Q9Y2J4 779 aa9.98□□□□□ -0.81
CHD1-204ENST00000505982 IREB2P48200 963 aaKnown RBP9.97□□□□□ -0.81
CHD1-204ENST00000505982 IDH3AP50213 366 aa9.97□□□□□ -0.81
CHD1-204ENST00000505982 GRIK5Q16478 980 aa9.97□□□□□ -0.81
CHD1-204ENST00000505982 PERM1Q5SV97 790 aa9.97□□□□□ -0.81
CHD1-204ENST00000505982 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CHD1-204ENST00000505982 GTF3C2Q8WUA4 911 aaPredicted RBP9.97□□□□□ -0.81
CHD1-204ENST00000505982 KRT25Q7Z3Z0 450 aa9.96□□□□□ -0.82
CHD1-204ENST00000505982 ZBTB42B2RXF5 422 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 FOXO3O43524 673 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 ICMTO60725 284 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 TARSP26639 723 aaKnown RBP9.95□□□□□ -0.82
CHD1-204ENST00000505982 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
CHD1-204ENST00000505982 NOS3P29474 1203 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 ARSDP51689 593 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 NAA30Q147X3 362 aaPredicted RBP9.95□□□□□ -0.82
CHD1-204ENST00000505982 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 ZFATQ9P243 1243 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 RNF112Q9ULX5 631 aa9.95□□□□□ -0.82
CHD1-204ENST00000505982 RARAP10276 462 aa9.94□□□□□ -0.82
CHD1-204ENST00000505982 ERCC3P19447 782 aa9.94□□□□□ -0.82
CHD1-204ENST00000505982 GPLD1P80108 840 aa9.94□□□□□ -0.82
CHD1-204ENST00000505982 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
CHD1-204ENST00000505982 DGKZQ13574 1117 aa9.93□□□□□ -0.82
CHD1-204ENST00000505982 MTMR3Q13615 1198 aa9.93□□□□□ -0.82
CHD1-204ENST00000505982 KRTAP1-3Q8IUG1 177 aa9.93□□□□□ -0.82
CHD1-204ENST00000505982 IFT43Q96FT9 208 aa9.93□□□□□ -0.82
CHD1-204ENST00000505982 E9PSI1 815 aa9.92□□□□□ -0.82
CHD1-204ENST00000505982 SASH3O75995 380 aa9.92□□□□□ -0.82
CHD1-204ENST00000505982 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD1-204ENST00000505982 MLLT1Q03111 559 aaPredicted RBP9.92□□□□□ -0.82
CHD1-204ENST00000505982 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
CHD1-204ENST00000505982 SMG9Q9H0W8 520 aaKnown RBP9.92□□□□□ -0.82
CHD1-204ENST00000505982 MICAL2O94851 1124 aa9.91□□□□□ -0.82
CHD1-204ENST00000505982 PLAURQ03405 335 aa9.91□□□□□ -0.82
CHD1-204ENST00000505982 C11orf91Q3C1V1 193 aa9.91□□□□□ -0.82
CHD1-204ENST00000505982 COL26A1Q96A83 441 aa9.91□□□□□ -0.82
CHD1-204ENST00000505982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHD1-204ENST00000505982 MAPK1P28482 360 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 NRLP54845 237 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 DNAJC14Q6Y2X3 702 aaPredicted RBP9.9□□□□□ -0.82
CHD1-204ENST00000505982 PRR23CQ6ZRP0 262 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 SLC51AQ86UW1 340 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 MEGF10Q96KG7 1140 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 KRTAP4-12Q9BQ66 201 aa9.9□□□□□ -0.82
CHD1-204ENST00000505982 HFE2Q6ZVN8 426 aa9.89□□□□□ -0.83
CHD1-204ENST00000505982 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
CHD1-204ENST00000505982 DLL1O00548 723 aa9.88□□□□□ -0.83
CHD1-204ENST00000505982 DEAF1O75398 565 aaPredicted RBP9.88□□□□□ -0.83
CHD1-204ENST00000505982 EIF2AK2P19525 551 aaKnown RBP9.88□□□□□ -0.83
CHD1-204ENST00000505982 LCE3BQ5TA77 95 aa9.88□□□□□ -0.83
CHD1-204ENST00000505982 AKTIPQ9H8T0 292 aa9.88□□□□□ -0.83
CHD1-204ENST00000505982 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
CHD1-204ENST00000505982 TLR7Q9NYK1 1049 aaKnown RBP9.88□□□□□ -0.83
CHD1-204ENST00000505982 ANKRD33BA6NCL7 494 aa9.87□□□□□ -0.83
CHD1-204ENST00000505982 MYO19Q96H55 970 aa9.87□□□□□ -0.83
CHD1-204ENST00000505982 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
CHD1-204ENST00000505982 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
CHD1-204ENST00000505982 FAM13AO94988 1023 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 EGFRP00533 1210 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 C16orf46Q6P387 395 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 DZIP1LQ8IYY4 767 aaKnown RBP9.86□□□□□ -0.83
CHD1-204ENST00000505982 TMEM130Q8N3G9 435 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 DCAF11Q8TEB1 546 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 DCTN4Q9UJW0 460 aa9.86□□□□□ -0.83
CHD1-204ENST00000505982 LOC102724428A0A0B4J2F2 783 aa9.85□□□□□ -0.83
CHD1-204ENST00000505982 PSAPP07602 524 aa9.85□□□□□ -0.83
CHD1-204ENST00000505982 SIK1P57059 783 aa9.85□□□□□ -0.83
CHD1-204ENST00000505982 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
CHD1-204ENST00000505982 SRA1Q9HD15 236 aaKnown RBP9.85□□□□□ -0.83
CHD1-204ENST00000505982 PCMTD2Q9NV79 361 aa9.85□□□□□ -0.83
CHD1-204ENST00000505982 RBM47A0AV96 593 aaKnown RBP9.84□□□□□ -0.83
CHD1-204ENST00000505982 OPLAHO14841 1288 aa9.84□□□□□ -0.83
CHD1-204ENST00000505982 XYLBO75191 536 aa9.84□□□□□ -0.83
CHD1-204ENST00000505982 GHRHP01286 108 aa9.84□□□□□ -0.83
CHD1-204ENST00000505982 AAMPQ13685 434 aa9.84□□□□□ -0.83
CHD1-204ENST00000505982 ZSCAN29Q8IWY8 852 aaPredicted RBP9.84□□□□□ -0.83
CHD1-204ENST00000505982 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
CHD1-204ENST00000505982 FSTP19883 344 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 MPSTP25325 297 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 ARHGAP4P98171 946 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 NOM1Q5C9Z4 860 aaKnown RBP9.83□□□□□ -0.84
CHD1-204ENST00000505982 GDF6Q6KF10 455 aaPredicted RBP9.83□□□□□ -0.84
CHD1-204ENST00000505982 MAP4K3Q8IVH8 894 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 CMTR1Q8N1G2 835 aaKnown RBP9.83□□□□□ -0.84
CHD1-204ENST00000505982 IL22RA1Q8N6P7 574 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
CHD1-204ENST00000505982 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
CHD1-204ENST00000505982 J3QW42 95 aa9.82□□□□□ -0.84
CHD1-204ENST00000505982 ALX3O95076 343 aa9.82□□□□□ -0.84
CHD1-204ENST00000505982 GIPC2Q8TF65 315 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms