RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
SGCA-205ENST00000505964 SH3TC1Q8TE82 1336 aa14.08□□□□□ -0.16
SGCA-205ENST00000505964 ZNF541Q9H0D2 1346 aa14.08□□□□□ -0.16
SGCA-205ENST00000505964 IQCA1LA6NCM1 817 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 TNRC18O15417 2968 aaPredicted RBP14.07□□□□□ -0.16
SGCA-205ENST00000505964 NTSR2O95665 410 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 FOXO4P98177 505 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 OLFM4Q6UX06 510 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 CNKSR1Q969H4 720 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 TRPM7Q96QT4 1865 aa14.07□□□□□ -0.16
SGCA-205ENST00000505964 IRS4O14654 1257 aaPredicted RBP14.06□□□□□ -0.16
SGCA-205ENST00000505964 PDE8AO60658 829 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 SLC34A2O95436 690 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 ITGBL1O95965 494 aaPredicted RBP14.06□□□□□ -0.16
SGCA-205ENST00000505964 SRGNP10124 158 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 ST5P78524 1137 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 EPHA10Q5JZY3 1008 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 JARID2Q92833 1246 aaPredicted RBP14.06□□□□□ -0.16
SGCA-205ENST00000505964 ZNF277Q9NRM2 450 aaPredicted RBP14.06□□□□□ -0.16
SGCA-205ENST00000505964 WBP1LQ9NX94 342 aa14.06□□□□□ -0.16
SGCA-205ENST00000505964 CSF1RP07333 972 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
SGCA-205ENST00000505964 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 MASTLQ96GX5 879 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
SGCA-205ENST00000505964 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
SGCA-205ENST00000505964 CASP8AP2Q9UKL3 1982 aa14.05□□□□□ -0.16
SGCA-205ENST00000505964 RTL5Q5HYW3 569 aaPredicted RBP14.04□□□□□ -0.16
SGCA-205ENST00000505964 MAP1SQ66K74 1059 aaPredicted RBP14.04□□□□□ -0.16
SGCA-205ENST00000505964 LMBR1LQ6UX01 489 aa14.04□□□□□ -0.16
SGCA-205ENST00000505964 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
SGCA-205ENST00000505964 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
SGCA-205ENST00000505964 RAB11FIP3O75154 756 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 EPHX2P34913 555 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 NUCB1Q02818 461 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 SOGA3Q5TF21 947 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
SGCA-205ENST00000505964 LTBP1Q14766 1721 aa14.02□□□□□ -0.16
SGCA-205ENST00000505964 RTL9Q8NET4 1388 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 SURF6O75683 361 aaKnown RBP14.02□□□□□ -0.17
SGCA-205ENST00000505964 RFX5P48382 616 aaPredicted RBP14.02□□□□□ -0.17
SGCA-205ENST00000505964 CTSWP56202 376 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 DEFB115Q30KQ5 88 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.17
SGCA-205ENST00000505964 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.17
SGCA-205ENST00000505964 ABT1Q9ULW3 272 aaKnown RBP14.02□□□□□ -0.17
SGCA-205ENST00000505964 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
SGCA-205ENST00000505964 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 FAM177BA6PVY3 158 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
SGCA-205ENST00000505964 FMR1Q06787 632 aaKnown RBP eCLIP14.01□□□□□ -0.17
SGCA-205ENST00000505964 GRM1Q13255 1194 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 ANKRD45Q5TZF3 282 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
SGCA-205ENST00000505964 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 EXOC6BQ9Y2D4 811 aa14.01□□□□□ -0.17
SGCA-205ENST00000505964 SPEF2Q9C093 1822 aa14□□□□□ -0.17
SGCA-205ENST00000505964 GTF2E1P29083 439 aaPredicted RBP14□□□□□ -0.17
SGCA-205ENST00000505964 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
SGCA-205ENST00000505964 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
SGCA-205ENST00000505964 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
SGCA-205ENST00000505964 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
SGCA-205ENST00000505964 THSD7BQ9C0I4 1608 aa14□□□□□ -0.17
SGCA-205ENST00000505964 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 COL4A5P29400 1685 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 CCDC85CA6NKD9 419 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
SGCA-205ENST00000505964 NPR1P16066 1061 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
SGCA-205ENST00000505964 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
SGCA-205ENST00000505964 SF3B3Q15393 1217 aaKnown RBP13.99□□□□□ -0.17
SGCA-205ENST00000505964 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 TSKSQ9UJT2 592 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 PDE4DIPQ5VU43 2346 aa13.99□□□□□ -0.17
SGCA-205ENST00000505964 ANKRD18BA2A2Z9 1011 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 CIAO1O76071 339 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
SGCA-205ENST00000505964 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
SGCA-205ENST00000505964 RHPN1Q8TCX5 695 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 PA2G4Q9UQ80 394 aaKnown RBP13.98□□□□□ -0.17
SGCA-205ENST00000505964 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
SGCA-205ENST00000505964 TAF1P21675 1872 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms