RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 MAP2K2P36507 400 aa23.16■■□□□ 1.3
CCND3-208ENST00000505672 RPS8P62241 208 aaKnown RBP23.16■■□□□ 1.3
CCND3-208ENST00000505672 TBC1D16Q8TBP0 767 aa23.16■■□□□ 1.3
CCND3-208ENST00000505672 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
CCND3-208ENST00000505672 SEC31BQ9NQW1 1179 aa23.16■■□□□ 1.3
CCND3-208ENST00000505672 SALL2Q9Y467 1007 aaPredicted RBP23.16■■□□□ 1.3
CCND3-208ENST00000505672 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
CCND3-208ENST00000505672 IL16Q14005 1332 aa23.15■■□□□ 1.3
CCND3-208ENST00000505672 DOK7Q18PE1 504 aa23.15■■□□□ 1.3
CCND3-208ENST00000505672 NCBP3Q53F19 620 aaKnown RBP23.15■■□□□ 1.3
CCND3-208ENST00000505672 USP48Q86UV5 1035 aa23.15■■□□□ 1.3
CCND3-208ENST00000505672 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
CCND3-208ENST00000505672 HHIPL1Q96JK4 782 aa23.15■■□□□ 1.3
CCND3-208ENST00000505672 ECE2O60344 883 aa23.14■■□□□ 1.29
CCND3-208ENST00000505672 ABHD8Q96I13 439 aa23.14■■□□□ 1.29
CCND3-208ENST00000505672 ZNF408Q9H9D4 720 aa23.14■■□□□ 1.29
CCND3-208ENST00000505672 TSKSQ9UJT2 592 aa23.14■■□□□ 1.29
CCND3-208ENST00000505672 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
CCND3-208ENST00000505672 JARID2Q92833 1246 aaPredicted RBP23.13■■□□□ 1.29
CCND3-208ENST00000505672 MYD88Q99836 296 aa23.13■■□□□ 1.29
CCND3-208ENST00000505672 TWISTNBQ3B726 338 aaPredicted RBP23.12■■□□□ 1.29
CCND3-208ENST00000505672 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
CCND3-208ENST00000505672 ZIC5Q96T25 663 aa23.12■■□□□ 1.29
CCND3-208ENST00000505672 BEGAINQ9BUH8 593 aa23.12■■□□□ 1.29
CCND3-208ENST00000505672 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
CCND3-208ENST00000505672 MYH3P11055 1940 aa23.12■■□□□ 1.29
CCND3-208ENST00000505672 DDX58O95786 925 aaKnown RBP23.11■■□□□ 1.29
CCND3-208ENST00000505672 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
CCND3-208ENST00000505672 POLR2AP24928 1970 aaKnown RBP23.1■■□□□ 1.29
CCND3-208ENST00000505672 SCN9AQ15858 1988 aa23.1■■□□□ 1.29
CCND3-208ENST00000505672 FANCIQ9NVI1 1328 aa23.1■■□□□ 1.29
CCND3-208ENST00000505672 CCDC191Q8NCU4 936 aa23.1■■□□□ 1.29
CCND3-208ENST00000505672 EYA3Q99504 573 aa23.1■■□□□ 1.29
CCND3-208ENST00000505672 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
CCND3-208ENST00000505672 VIL1P09327 827 aaKnown RBP23.09■■□□□ 1.29
CCND3-208ENST00000505672 RPS12P25398 132 aaKnown RBP23.09■■□□□ 1.29
CCND3-208ENST00000505672 RBM26Q5T8P6 1007 aaKnown RBP23.09■■□□□ 1.29
CCND3-208ENST00000505672 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
CCND3-208ENST00000505672 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
CCND3-208ENST00000505672 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
CCND3-208ENST00000505672 BRPF1P55201 1214 aaPredicted RBP23.07■■□□□ 1.28
CCND3-208ENST00000505672 KRT26Q7Z3Y9 468 aa23.07■■□□□ 1.28
CCND3-208ENST00000505672 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
CCND3-208ENST00000505672 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
CCND3-208ENST00000505672 ADM5C9JUS6 153 aa23.06■■□□□ 1.28
CCND3-208ENST00000505672 PDE8AO60658 829 aa23.06■■□□□ 1.28
CCND3-208ENST00000505672 HUNKP57058 714 aa23.06■■□□□ 1.28
CCND3-208ENST00000505672 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
CCND3-208ENST00000505672 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
CCND3-208ENST00000505672 ASTN2O75129 1339 aaPredicted RBP23.06■■□□□ 1.28
CCND3-208ENST00000505672 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
CCND3-208ENST00000505672 WTIPA6NIX2 430 aaPredicted RBP23.05■■□□□ 1.28
CCND3-208ENST00000505672 UFL1O94874 794 aa23.05■■□□□ 1.28
CCND3-208ENST00000505672 CCDC152Q4G0S7 254 aa23.05■■□□□ 1.28
CCND3-208ENST00000505672 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
CCND3-208ENST00000505672 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
CCND3-208ENST00000505672 FAM155AB1AL88 458 aaPredicted RBP23.04■■□□□ 1.28
CCND3-208ENST00000505672 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CCND3-208ENST00000505672 IGKV5-2P06315 115 aa23.04■■□□□ 1.28
CCND3-208ENST00000505672 G2E3Q7L622 706 aa23.04■■□□□ 1.28
CCND3-208ENST00000505672 GGA1Q9UJY5 639 aa23.04■■□□□ 1.28
CCND3-208ENST00000505672 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
CCND3-208ENST00000505672 CA12O43570 354 aa23.03■■□□□ 1.28
CCND3-208ENST00000505672 HSP90B1P14625 803 aaKnown RBP23.03■■□□□ 1.28
CCND3-208ENST00000505672 KIF4BQ2VIQ3 1234 aa23.03■■□□□ 1.28
CCND3-208ENST00000505672 DCPSQ96C86 337 aaKnown RBP23.03■■□□□ 1.28
CCND3-208ENST00000505672 GBA2Q9HCG7 927 aaPredicted RBP23.03■■□□□ 1.28
CCND3-208ENST00000505672 CASP8AP2Q9UKL3 1982 aa23.02■■□□□ 1.28
CCND3-208ENST00000505672 EXOSC9Q06265 439 aaKnown RBP23.02■■□□□ 1.28
CCND3-208ENST00000505672 NOGQ13253 232 aa23.02■■□□□ 1.28
CCND3-208ENST00000505672 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
CCND3-208ENST00000505672 ZNF280AP59817 542 aaPredicted RBP23.01■■□□□ 1.27
CCND3-208ENST00000505672 NEXNQ0ZGT2 675 aa23.01■■□□□ 1.27
CCND3-208ENST00000505672 RGMBQ6NW40 437 aa23.01■■□□□ 1.27
CCND3-208ENST00000505672 GMLQ99445 158 aa23.01■■□□□ 1.27
CCND3-208ENST00000505672 VAMP4O75379 141 aa23■■□□□ 1.27
CCND3-208ENST00000505672 RSBN1LQ6PCB5 846 aaPredicted RBP23■■□□□ 1.27
CCND3-208ENST00000505672 ANKRD18AQ8IVF6 992 aa23■■□□□ 1.27
CCND3-208ENST00000505672 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
CCND3-208ENST00000505672 GGA3Q9NZ52 723 aa23■■□□□ 1.27
CCND3-208ENST00000505672 CCDC85CA6NKD9 419 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 FLIIQ13045 1269 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 SCARF1Q14162 830 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 C2orf69Q8N8R5 385 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 AGBL3Q8NEM8 1001 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 XDHP47989 1333 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 ZNF609O15014 1411 aa22.99■■□□□ 1.27
CCND3-208ENST00000505672 G3V3G9 751 aa22.98■■□□□ 1.27
CCND3-208ENST00000505672 CTSWP56202 376 aa22.98■■□□□ 1.27
CCND3-208ENST00000505672 CWF19L2Q2TBE0 894 aaKnown RBP22.98■■□□□ 1.27
CCND3-208ENST00000505672 DCAF8Q5TAQ9 597 aa22.98■■□□□ 1.27
CCND3-208ENST00000505672 MCOLN1Q9GZU1 580 aa22.98■■□□□ 1.27
CCND3-208ENST00000505672 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
CCND3-208ENST00000505672 PSME4Q14997 1843 aa22.97■■□□□ 1.27
CCND3-208ENST00000505672 ATP2B4P23634 1241 aa22.97■■□□□ 1.27
CCND3-208ENST00000505672 KIF23Q02241 960 aaPredicted RBP22.97■■□□□ 1.27
CCND3-208ENST00000505672 FKBP5Q13451 457 aaPredicted RBP22.97■■□□□ 1.27
CCND3-208ENST00000505672 ANGEL2Q5VTE6 544 aaKnown RBP22.97■■□□□ 1.27
CCND3-208ENST00000505672 CDCA5Q96FF9 252 aa22.97■■□□□ 1.27
CCND3-208ENST00000505672 GREM2Q9H772 168 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms