RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
NFKB1-205ENST00000505458 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
NFKB1-205ENST00000505458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-205ENST00000505458 MROH5Q6ZUA9 1318 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 CLEC4GQ6UXB4 293 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 MYH7P12883 1935 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 UQCRFS1P1P0C7P4 283 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 PDCP20941 246 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 ZMYM1Q5SVZ6 1142 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-205ENST00000505458 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.53□□□□□ -0.24
NFKB1-205ENST00000505458 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
NFKB1-205ENST00000505458 RNF113AO15541 343 aaKnown RBP13.52□□□□□ -0.24
NFKB1-205ENST00000505458 ARXQ96QS3 562 aa13.52□□□□□ -0.24
NFKB1-205ENST00000505458 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.24
NFKB1-205ENST00000505458 ATP2B3Q16720 1220 aa13.52□□□□□ -0.25
NFKB1-205ENST00000505458 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
NFKB1-205ENST00000505458 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
NFKB1-205ENST00000505458 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.25
NFKB1-205ENST00000505458 ITGA6P23229 1130 aa13.52□□□□□ -0.25
NFKB1-205ENST00000505458 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
NFKB1-205ENST00000505458 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
NFKB1-205ENST00000505458 METTL24Q5JXM2 366 aa13.52□□□□□ -0.25
NFKB1-205ENST00000505458 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 MRE11P49959 708 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 HLFQ16534 295 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 RIPOR2Q9Y4F9 1068 aa13.51□□□□□ -0.25
NFKB1-205ENST00000505458 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-205ENST00000505458 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-205ENST00000505458 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
NFKB1-205ENST00000505458 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-205ENST00000505458 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 GOLIM4O00461 696 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
NFKB1-205ENST00000505458 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
NFKB1-205ENST00000505458 CCDC152Q4G0S7 254 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-205ENST00000505458 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-205ENST00000505458 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 GPTP24298 496 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
NFKB1-205ENST00000505458 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
NFKB1-205ENST00000505458 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-205ENST00000505458 ATRNO75882 1429 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 TIMM10P62072 90 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
NFKB1-205ENST00000505458 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
NFKB1-205ENST00000505458 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 NEK1Q96PY6 1258 aa13.49□□□□□ -0.25
NFKB1-205ENST00000505458 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 ZNF589Q86UQ0 364 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-205ENST00000505458 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
NFKB1-205ENST00000505458 PDE8BO95263 885 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 SLC5A1P13866 664 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 LPIN2Q92539 896 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
NFKB1-205ENST00000505458 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 APPBP2Q92624 585 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
NFKB1-205ENST00000505458 GREM2Q9H772 168 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 LMBRD1Q9NUN5 540 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
NFKB1-205ENST00000505458 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
NFKB1-205ENST00000505458 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
NFKB1-205ENST00000505458 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
NFKB1-205ENST00000505458 STX6O43752 255 aa13.47□□□□□ -0.25
NFKB1-205ENST00000505458 ARID4AP29374 1257 aaPredicted RBP13.47□□□□□ -0.25
NFKB1-205ENST00000505458 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
NFKB1-205ENST00000505458 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
NFKB1-205ENST00000505458 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
NFKB1-205ENST00000505458 PHF14O94880 888 aa13.46□□□□□ -0.25
NFKB1-205ENST00000505458 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
NFKB1-205ENST00000505458 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
NFKB1-205ENST00000505458 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.25
NFKB1-205ENST00000505458 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.26
NFKB1-205ENST00000505458 ZNF445P59923 1031 aa13.46□□□□□ -0.26
NFKB1-205ENST00000505458 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.26
NFKB1-205ENST00000505458 MPHOSPH8Q99549 860 aa13.46□□□□□ -0.26
NFKB1-205ENST00000505458 MAST3O60307 1309 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 AKAP11Q9UKA4 1901 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 ITPK1Q13572 414 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
NFKB1-205ENST00000505458 DHX32Q7L7V1 743 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms