RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
LIN54-204ENST00000505397 TCIRG1Q13488 830 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 TSGA10IPQ3SY00 556 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 KLHDC4Q8TBB5 520 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 CHMP3Q9Y3E7 222 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 SPATA31A6Q5VVP1 1343 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 VPS72Q15906 364 aa20.15■□□□□ 0.82
LIN54-204ENST00000505397 FAM98CQ17RN3 349 aaKnown RBP20.15■□□□□ 0.82
LIN54-204ENST00000505397 COL9A3Q14050 684 aaPredicted RBP20.14■□□□□ 0.82
LIN54-204ENST00000505397 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
LIN54-204ENST00000505397 MAP3K15Q6ZN16 1313 aa20.14■□□□□ 0.81
LIN54-204ENST00000505397 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
LIN54-204ENST00000505397 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
LIN54-204ENST00000505397 NECAB1Q8N987 351 aa20.14■□□□□ 0.81
LIN54-204ENST00000505397 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
LIN54-204ENST00000505397 BOLA2Q9H3K6 86 aa20.13■□□□□ 0.81
LIN54-204ENST00000505397 USP25Q9UHP3 1055 aa20.13■□□□□ 0.81
LIN54-204ENST00000505397 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
LIN54-204ENST00000505397 PTMAP06454 111 aaKnown RBP20.13■□□□□ 0.81
LIN54-204ENST00000505397 ANKRD1Q15327 319 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 RNF20Q5VTR2 975 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 FSD1Q9BTV5 496 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 KCNJ4P48050 445 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 PTPN12Q05209 780 aaKnown RBP20.12■□□□□ 0.81
LIN54-204ENST00000505397 ANKRD36CQ5JPF3 1778 aa20.12■□□□□ 0.81
LIN54-204ENST00000505397 KDM4AO75164 1064 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 ADCY5O95622 1261 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 RFX5P48382 616 aaPredicted RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 HSP90AB3PQ58FF7 597 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 USPL1Q5W0Q7 1092 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 HMG20BQ9P0W2 317 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 ELP1O95163 1332 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 BLOC1S2Q6QNY1 142 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 GIGYF2Q6Y7W6 1299 aaKnown RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 VPS37CA5D8V6 355 aaPredicted RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 DTNBO60941 627 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 IL6STP40189 918 aaPredicted RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 FOXO4P98177 505 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 TOB2Q14106 344 aaPredicted RBP20.11■□□□□ 0.81
LIN54-204ENST00000505397 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 PDCL3Q9H2J4 239 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
LIN54-204ENST00000505397 ATP6V1AP38606 617 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 GIMAP6Q6P9H5 292 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 ZNF589Q86UQ0 364 aaPredicted RBP20.1■□□□□ 0.81
LIN54-204ENST00000505397 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
LIN54-204ENST00000505397 TAF5LO75529 589 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 ATP5JP18859 108 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 PDCP20941 246 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 USP21Q9UK80 565 aa20.1■□□□□ 0.81
LIN54-204ENST00000505397 RFX7Q2KHR2 1363 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 NUP98P52948 1817 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 SIK1P57059 783 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 CDC37L1Q7L3B6 337 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
LIN54-204ENST00000505397 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
LIN54-204ENST00000505397 KRT85P78386 507 aa20.08■□□□□ 0.81
LIN54-204ENST00000505397 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.81
LIN54-204ENST00000505397 MEX3CQ5U5Q3 659 aaKnown RBP20.08■□□□□ 0.8
LIN54-204ENST00000505397 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.8
LIN54-204ENST00000505397 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.8
LIN54-204ENST00000505397 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
LIN54-204ENST00000505397 DBNLQ9UJU6 430 aaKnown RBP20.07■□□□□ 0.8
LIN54-204ENST00000505397 UQCRHLA0A096LP55 91 aa20.07■□□□□ 0.8
LIN54-204ENST00000505397 UQCRHP07919 91 aa20.07■□□□□ 0.8
LIN54-204ENST00000505397 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
LIN54-204ENST00000505397 CICQ96RK0 1608 aaPredicted RBP20.07■□□□□ 0.8
LIN54-204ENST00000505397 HLFQ16534 295 aa20.06■□□□□ 0.8
LIN54-204ENST00000505397 TNNI3KQ59H18 835 aa20.06■□□□□ 0.8
LIN54-204ENST00000505397 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
LIN54-204ENST00000505397 FPGT-TNNI3KV9GXZ4 949 aa20.06■□□□□ 0.8
LIN54-204ENST00000505397 GPTP24298 496 aa20.06■□□□□ 0.8
LIN54-204ENST00000505397 TFCP2Q12800 502 aa20.06■□□□□ 0.8
LIN54-204ENST00000505397 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 ERVV-1B6SEH8 477 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 AP5Z1O43299 807 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
LIN54-204ENST00000505397 KRT32Q14532 448 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 GLIPR1L2Q4G1C9 344 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 EDC3Q96F86 508 aaKnown RBP20.05■□□□□ 0.8
LIN54-204ENST00000505397 FAM89AQ96GI7 184 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
LIN54-204ENST00000505397 DYNC1I1O14576 645 aa20.04■□□□□ 0.8
LIN54-204ENST00000505397 KCNQ2O43526 872 aa20.04■□□□□ 0.8
LIN54-204ENST00000505397 CCDC192P0DO97 292 aa20.04■□□□□ 0.8
LIN54-204ENST00000505397 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
LIN54-204ENST00000505397 NLRP10Q86W26 655 aa20.04■□□□□ 0.8
LIN54-204ENST00000505397 ZNF830Q96NB3 372 aaPredicted RBP20.04■□□□□ 0.8
LIN54-204ENST00000505397 FERMT3Q86UX7 667 aa20.03■□□□□ 0.8
LIN54-204ENST00000505397 SCAND2PQ9GZW5 306 aaPredicted RBP20.03■□□□□ 0.8
LIN54-204ENST00000505397 SPTLC3Q9NUV7 552 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1152.8 ms