RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FZD9O00144 591 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 RASSF7Q02833 373 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-220ENST00000505005 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 GREM2Q9H772 168 aa12.32□□□□□ -0.44
NR1I3-220ENST00000505005 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-220ENST00000505005 KCNJ4P48050 445 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 FOXO4P98177 505 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 PODNQ7Z5L7 613 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-220ENST00000505005 DZIP1LQ8IYY4 767 aaKnown RBP12.31□□□□□ -0.44
NR1I3-220ENST00000505005 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-220ENST00000505005 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 RCAN3Q9UKA8 241 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 MROH5Q6ZUA9 1318 aa12.31□□□□□ -0.44
NR1I3-220ENST00000505005 TOMM70O94826 608 aa12.3□□□□□ -0.44
NR1I3-220ENST00000505005 GNAI2P04899 355 aa12.3□□□□□ -0.44
NR1I3-220ENST00000505005 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-220ENST00000505005 TRIM27P14373 513 aa12.3□□□□□ -0.44
NR1I3-220ENST00000505005 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
NR1I3-220ENST00000505005 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-220ENST00000505005 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
NR1I3-220ENST00000505005 LRRC37AA6NMS7 1700 aa12.29□□□□□ -0.44
NR1I3-220ENST00000505005 UFL1O94874 794 aa12.29□□□□□ -0.44
NR1I3-220ENST00000505005 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
NR1I3-220ENST00000505005 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
NR1I3-220ENST00000505005 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
NR1I3-220ENST00000505005 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 BCAR3O75815 825 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 FSTL1Q12841 308 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 COA1Q9GZY4 146 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 BICC1Q9H694 974 aaKnown RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
NR1I3-220ENST00000505005 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
NR1I3-220ENST00000505005 SCN4AP35499 1836 aa12.27□□□□□ -0.44
NR1I3-220ENST00000505005 GPSM2P81274 684 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 AOC3Q16853 763 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 DPF2Q92785 391 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 SUCLG2Q96I99 432 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 ZNF804BA4D1E1 1349 aa12.27□□□□□ -0.45
NR1I3-220ENST00000505005 TIAM2Q8IVF5 1701 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 CIAO1O76071 339 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 CHRNDQ07001 517 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 MTX1Q13505 466 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
NR1I3-220ENST00000505005 UTRNP46939 3433 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 H7C1D1 291 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
NR1I3-220ENST00000505005 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-220ENST00000505005 AAMPQ13685 434 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-220ENST00000505005 AGBL3Q8NEM8 1001 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-220ENST00000505005 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
NR1I3-220ENST00000505005 EYA2O00167 538 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 ECE2O60344 883 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 DDNO94850 711 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-220ENST00000505005 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-220ENST00000505005 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 VPS37DQ86XT2 251 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 ITPRIPQ8IWB1 547 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 OGFOD1Q8N543 542 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
NR1I3-220ENST00000505005 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 COPRSQ9NQ92 184 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
NR1I3-220ENST00000505005 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 HMMRO75330 724 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 PDE8BO95263 885 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 FKBP1AP62942 108 aaKnown RBP12.23□□□□□ -0.45
NR1I3-220ENST00000505005 CXCL9Q07325 125 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 STRIP1Q5VSL9 837 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms