RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 PTPN12Q05209 780 aaKnown RBP22.65■■□□□ 1.22
DDR1-254ENST00000504679 PODXL2Q9NZ53 605 aa22.65■■□□□ 1.22
DDR1-254ENST00000504679 COL4A1P02462 1669 aa22.65■■□□□ 1.22
DDR1-254ENST00000504679 C6orf229H3BNL8 230 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 LMNB1P20700 586 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 RASSF7Q02833 373 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 SLC51AQ86UW1 340 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 RPAP2Q8IXW5 612 aaPredicted RBP22.64■■□□□ 1.21
DDR1-254ENST00000504679 KLHDC4Q8TBB5 520 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 CRBNQ96SW2 442 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 RTFDC1Q9BY42 306 aaPredicted RBP22.64■■□□□ 1.21
DDR1-254ENST00000504679 VPS33BQ9H267 617 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 FBXO3Q9UK99 471 aa22.64■■□□□ 1.21
DDR1-254ENST00000504679 UTRNP46939 3433 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 XDHP47989 1333 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 ATP2B4P23634 1241 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 CHRNDQ07001 517 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 PUS3Q9BZE2 481 aaKnown RBP22.63■■□□□ 1.21
DDR1-254ENST00000504679 COPRSQ9NQ92 184 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 GGA1Q9UJY5 639 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 RIPOR2Q9Y4F9 1068 aa22.63■■□□□ 1.21
DDR1-254ENST00000504679 SPEF2Q9C093 1822 aa22.62■■□□□ 1.21
DDR1-254ENST00000504679 PNMA6EA0A0J9YXQ4 647 aa22.62■■□□□ 1.21
DDR1-254ENST00000504679 EYA2O00167 538 aa22.62■■□□□ 1.21
DDR1-254ENST00000504679 CEP85Q6P2H3 762 aa22.62■■□□□ 1.21
DDR1-254ENST00000504679 LEMD3Q9Y2U8 911 aa22.62■■□□□ 1.21
DDR1-254ENST00000504679 MROH5Q6ZUA9 1318 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 LRRC24Q50LG9 513 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 TBC1D16Q8TBP0 767 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 SSH3Q8TE77 659 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 SNED1Q8TER0 1413 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 EYA3Q99504 573 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 ZNF277Q9NRM2 450 aaPredicted RBP22.61■■□□□ 1.21
DDR1-254ENST00000504679 POLLQ9UGP5 575 aa22.61■■□□□ 1.21
DDR1-254ENST00000504679 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 UFL1O94874 794 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 IARSP41252 1262 aaKnown RBP22.6■■□□□ 1.21
DDR1-254ENST00000504679 AAMPQ13685 434 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 POLA2Q14181 598 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 WASHC4Q2M389 1173 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 C9orf131Q5VYM1 1079 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 HELBQ8NG08 1087 aaPredicted RBP22.6■■□□□ 1.21
DDR1-254ENST00000504679 SIL1Q9H173 461 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 RNF181Q9P0P0 153 aa22.6■■□□□ 1.21
DDR1-254ENST00000504679 PA2G4Q9UQ80 394 aaKnown RBP22.6■■□□□ 1.21
DDR1-254ENST00000504679 HMMRO75330 724 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 CIAO1O76071 339 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 KCNJ4P48050 445 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 METTL24Q5JXM2 366 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 ZC3H12CQ9C0D7 883 aaKnown RBP22.59■■□□□ 1.21
DDR1-254ENST00000504679 SBF1O95248 1867 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 CCDC88AQ3V6T2 1871 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 CHD4Q14839 1912 aa22.59■■□□□ 1.21
DDR1-254ENST00000504679 TAF5LO75529 589 aa22.58■■□□□ 1.21
DDR1-254ENST00000504679 IL15P40933 162 aaPredicted RBP22.58■■□□□ 1.21
DDR1-254ENST00000504679 G3BP1Q13283 466 aaKnown RBP eCLIP22.58■■□□□ 1.21
DDR1-254ENST00000504679 PPIP5K2O43314 1243 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 PRELPP51888 382 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 ATG9AQ7Z3C6 839 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 LARGE2Q8N3Y3 721 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 JDP2Q8WYK2 163 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 CEP126Q9P2H0 1117 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 ZNF804BA4D1E1 1349 aa22.57■■□□□ 1.2
DDR1-254ENST00000504679 RIMBP2O15034 1052 aa22.56■■□□□ 1.2
DDR1-254ENST00000504679 SURF6O75683 361 aaKnown RBP22.56■■□□□ 1.2
DDR1-254ENST00000504679 KIAA2012Q0VF49 1180 aa22.56■■□□□ 1.2
DDR1-254ENST00000504679 AOC3Q16853 763 aa22.56■■□□□ 1.2
DDR1-254ENST00000504679 G3V3G9 751 aa22.55■■□□□ 1.2
DDR1-254ENST00000504679 PDE8BO95263 885 aa22.55■■□□□ 1.2
DDR1-254ENST00000504679 UBE4AQ14139 1066 aa22.55■■□□□ 1.2
DDR1-254ENST00000504679 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
DDR1-254ENST00000504679 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
DDR1-254ENST00000504679 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
DDR1-254ENST00000504679 EXOC6Q8TAG9 804 aa22.54■■□□□ 1.2
DDR1-254ENST00000504679 WTIPA6NIX2 430 aaPredicted RBP22.53■■□□□ 1.2
DDR1-254ENST00000504679 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
DDR1-254ENST00000504679 GPR101Q96P66 508 aaPredicted RBP22.53■■□□□ 1.2
DDR1-254ENST00000504679 NOP58Q9Y2X3 529 aaKnown RBP22.53■■□□□ 1.2
DDR1-254ENST00000504679 IRX6P78412 446 aaPredicted RBP22.52■■□□□ 1.2
DDR1-254ENST00000504679 HSP90AB4PQ58FF6 505 aa22.52■■□□□ 1.2
DDR1-254ENST00000504679 DICER1Q9UPY3 1922 aaKnown RBP22.51■■□□□ 1.19
DDR1-254ENST00000504679 SNAP23O00161 211 aa22.51■■□□□ 1.19
DDR1-254ENST00000504679 VGLL2Q8N8G2 317 aa22.51■■□□□ 1.19
DDR1-254ENST00000504679 PCDHB15Q9Y5E8 787 aa22.51■■□□□ 1.19
DDR1-254ENST00000504679 ZC3H4Q9UPT8 1303 aaKnown RBP22.51■■□□□ 1.19
DDR1-254ENST00000504679 LTBP1Q14766 1721 aa22.51■■□□□ 1.19
DDR1-254ENST00000504679 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
DDR1-254ENST00000504679 PUM3Q15397 648 aaKnown RBP22.5■■□□□ 1.19
DDR1-254ENST00000504679 C15orf52Q6ZUT6 534 aaKnown RBP22.5■■□□□ 1.19
DDR1-254ENST00000504679 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
DDR1-254ENST00000504679 AKAP2Q9Y2D5 859 aa22.5■■□□□ 1.19
DDR1-254ENST00000504679 MED23Q9ULK4 1368 aa22.5■■□□□ 1.19
DDR1-254ENST00000504679 IFIT1P09914 478 aaKnown RBP22.49■■□□□ 1.19
DDR1-254ENST00000504679 TFCP2Q12800 502 aa22.49■■□□□ 1.19
DDR1-254ENST00000504679 DOK7Q18PE1 504 aa22.49■■□□□ 1.19
DDR1-254ENST00000504679 DPY19L2Q6NUT2 758 aa22.49■■□□□ 1.19
DDR1-254ENST00000504679 FZD9O00144 591 aa22.48■■□□□ 1.19
DDR1-254ENST00000504679 SASH1O94885 1247 aa22.48■■□□□ 1.19
DDR1-254ENST00000504679 EIF6P56537 245 aaKnown RBP22.48■■□□□ 1.19
DDR1-254ENST00000504679 ERC1Q8IUD2 1116 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1115.8 ms