RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
NEDD9-209ENST00000504634 DGKZQ13574 1117 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 SULF1Q8IWU6 871 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 ZIC5Q96T25 663 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 KCNQ5Q9NR82 932 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 ANKIB1Q9P2G1 1089 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
NEDD9-209ENST00000504634 UFL1O94874 794 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 EGFRP00533 1210 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
NEDD9-209ENST00000504634 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 ZBTB38Q8NAP3 1195 aaPredicted RBP15.69■□□□□ 0.1
NEDD9-209ENST00000504634 CCDC102AQ96A19 550 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 TRPM7Q96QT4 1865 aa15.69■□□□□ 0.1
NEDD9-209ENST00000504634 ANKRD36CQ5JPF3 1778 aa15.68■□□□□ 0.1
NEDD9-209ENST00000504634 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
NEDD9-209ENST00000504634 ZNF157P51786 506 aaPredicted RBP15.68■□□□□ 0.1
NEDD9-209ENST00000504634 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
NEDD9-209ENST00000504634 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
NEDD9-209ENST00000504634 RGS19P49795 217 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 CCDC152Q4G0S7 254 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 MYD88Q99836 296 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 SEC31BQ9NQW1 1179 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 GGA3Q9NZ52 723 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 PODXL2Q9NZ53 605 aa15.67■□□□□ 0.1
NEDD9-209ENST00000504634 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
NEDD9-209ENST00000504634 VIL1P09327 827 aaKnown RBP15.66■□□□□ 0.1
NEDD9-209ENST00000504634 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
NEDD9-209ENST00000504634 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
NEDD9-209ENST00000504634 LAMB2P55268 1798 aa15.66■□□□□ 0.1
NEDD9-209ENST00000504634 FAM155AB1AL88 458 aaPredicted RBP15.65■□□□□ 0.1
NEDD9-209ENST00000504634 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
NEDD9-209ENST00000504634 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
NEDD9-209ENST00000504634 PHAXQ9H814 394 aaKnown RBP15.65■□□□□ 0.1
NEDD9-209ENST00000504634 SAGE1Q9NXZ1 904 aa15.65■□□□□ 0.1
NEDD9-209ENST00000504634 LRRC37AA6NMS7 1700 aa15.64■□□□□ 0.09
NEDD9-209ENST00000504634 DDX58O95786 925 aaKnown RBP15.64■□□□□ 0.09
NEDD9-209ENST00000504634 GNAI1P63096 354 aa15.64■□□□□ 0.09
NEDD9-209ENST00000504634 RSBN1LQ6PCB5 846 aaPredicted RBP15.64■□□□□ 0.09
NEDD9-209ENST00000504634 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
NEDD9-209ENST00000504634 CDCA5Q96FF9 252 aa15.64■□□□□ 0.09
NEDD9-209ENST00000504634 IFT57Q9NWB7 429 aa15.64■□□□□ 0.09
NEDD9-209ENST00000504634 CWC25Q9NXE8 425 aaPredicted RBP15.64■□□□□ 0.09
NEDD9-209ENST00000504634 ASTN2O75129 1339 aaPredicted RBP15.64■□□□□ 0.09
NEDD9-209ENST00000504634 PDE8AO60658 829 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 TRPA1O75762 1119 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
NEDD9-209ENST00000504634 SCARF1Q14162 830 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 ANGEL2Q5VTE6 544 aaKnown RBP15.63■□□□□ 0.09
NEDD9-209ENST00000504634 ANKRD18AQ8IVF6 992 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 AGBL3Q8NEM8 1001 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 RNF186Q9NXI6 227 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 XDHP47989 1333 aa15.63■□□□□ 0.09
NEDD9-209ENST00000504634 APAF1O14727 1248 aa15.62■□□□□ 0.09
NEDD9-209ENST00000504634 USP17L8P0C7I0 530 aa15.62■□□□□ 0.09
NEDD9-209ENST00000504634 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
NEDD9-209ENST00000504634 ZNF280AP59817 542 aaPredicted RBP15.62■□□□□ 0.09
NEDD9-209ENST00000504634 DDX60Q8IY21 1712 aaKnown RBP15.62■□□□□ 0.09
NEDD9-209ENST00000504634 TAF1P21675 1872 aa15.61■□□□□ 0.09
NEDD9-209ENST00000504634 SLC10A3P09131 477 aa15.61■□□□□ 0.09
NEDD9-209ENST00000504634 ATP2B4P23634 1241 aa15.61■□□□□ 0.09
NEDD9-209ENST00000504634 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
NEDD9-209ENST00000504634 MYOZ2Q9NPC6 264 aa15.61■□□□□ 0.09
NEDD9-209ENST00000504634 COL4A1P02462 1669 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 USP17L3A6NCW0 530 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 USP17L4A6NCW7 530 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 USP17L1Q7RTZ2 530 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 PODNQ7Z5L7 613 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
NEDD9-209ENST00000504634 CSRNP1Q96S65 589 aa15.6■□□□□ 0.09
NEDD9-209ENST00000504634 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
NEDD9-209ENST00000504634 FKBP1BP68106 108 aa15.59■□□□□ 0.09
NEDD9-209ENST00000504634 C8orf58Q8NAV2 365 aa15.59■□□□□ 0.09
NEDD9-209ENST00000504634 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
NEDD9-209ENST00000504634 MAP3K2Q9Y2U5 619 aa15.59■□□□□ 0.09
NEDD9-209ENST00000504634 CTSWP56202 376 aa15.58■□□□□ 0.08
NEDD9-209ENST00000504634 NEXNQ0ZGT2 675 aa15.58■□□□□ 0.08
NEDD9-209ENST00000504634 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.08
NEDD9-209ENST00000504634 RASAL3Q86YV0 1011 aa15.58■□□□□ 0.08
NEDD9-209ENST00000504634 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
NEDD9-209ENST00000504634 OGFOD1Q8N543 542 aa15.57■□□□□ 0.08
NEDD9-209ENST00000504634 GMLQ99445 158 aa15.57■□□□□ 0.08
NEDD9-209ENST00000504634 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
NEDD9-209ENST00000504634 ZNF609O15014 1411 aa15.57■□□□□ 0.08
NEDD9-209ENST00000504634 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
NEDD9-209ENST00000504634 SOX10P56693 466 aa15.56■□□□□ 0.08
NEDD9-209ENST00000504634 KSR2Q6VAB6 950 aa15.56■□□□□ 0.08
NEDD9-209ENST00000504634 CTU1Q7Z7A3 348 aaKnown RBP15.56■□□□□ 0.08
NEDD9-209ENST00000504634 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
NEDD9-209ENST00000504634 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
NEDD9-209ENST00000504634 BSDC1Q9NW68 430 aaPredicted RBP15.56■□□□□ 0.08
NEDD9-209ENST00000504634 MINPP1Q9UNW1 487 aa15.56■□□□□ 0.08
NEDD9-209ENST00000504634 SCAF8Q9UPN6 1271 aaKnown RBP15.56■□□□□ 0.08
NEDD9-209ENST00000504634 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 PI4KAP2A4QPH2 592 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms